| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,439,767 | +G | 1.8% | intergenic (‑70/+93) | RCAP_rcc03240 ← / ← mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,439,767 | 1 | .→G | 1.8% | 4.4 ‑3.5 ‑0.0 | 228 | intergenic (‑70/+93) | RCAP_rcc03240/mutB | ATPase AAA/methylmalonyl‑CoA mutase large subunit |
| Reads supporting (aligned to +/- strand): new base (4/0): ref base (93/131): total (97/131) | ||||||||||
| Fisher's exact test strand distribution p-value = 3.16e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 9.56e-01 | ||||||||||
Only 100 of 259 total aligned reads displayed.
CGGAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCG > NC_014034/3439667‑3439869
|
cGGAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCcggc < 1:1967847/101‑1 (MQ=255)
cGGAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCcggc < 1:4327770/101‑1 (MQ=255)
ggAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCcggc..g > 2:2344462/1‑101 (MQ=255)
ggAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCcggc..g > 1:4803824/1‑101 (MQ=255)
gagaAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCAGCCGATGCCTCcggc..gg > 2:4544659/1‑101 (MQ=255)
aaaGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..ggggg > 2:1724875/1‑100 (MQ=255)
aGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..gggggga > 1:266162/1‑98 (MQ=255)
aGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGgt.a > 2:269106/1‑101 (MQ=255)
aGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGat.a < 1:1357623/101‑1 (MQ=255)
gTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..gggggggg > 1:1994070/1‑97 (MQ=255)
tGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.tt < 1:880577/101‑1 (MQ=255)
tGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.tt < 1:202159/101‑1 (MQ=255)
aCGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCCGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAG.A.TTTg > 2:1414926/1‑101 (MQ=255)
aCGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTg > 2:1883131/1‑101 (MQ=255)
cGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTgg < 2:1757602/101‑1 (MQ=255)
ggTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTggg > 2:3603989/1‑101 (MQ=255)
gTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTgggg < 2:3929175/101‑1 (MQ=255)
tGGCAGGCAGGCTCATGGCGGCGACCCTACACGTCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGc < 2:1123486/101‑1 (MQ=255)
tGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGTAA.TTTgggg > 2:1297641/1‑101 (MQ=255)
ggcaggcaGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCa > 1:2543850/1‑101 (MQ=255)
ggcaggcaGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCa < 1:3228677/101‑1 (MQ=255)
caggcaggCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAg < 2:4914049/101‑1 (MQ=255)
aggcaggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGa < 1:2695652/101‑1 (MQ=255)
gcaggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATa < 1:1817812/101‑1 (MQ=255)
aggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTTGGGGGAGATaaa > 2:4692269/1‑101 (MQ=255)
aggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATaaa < 2:4631266/101‑1 (MQ=255)
aggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATaaa < 2:647432/101‑1 (MQ=255)
ggcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAg < 1:455882/101‑1 (MQ=255)
gcTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAgg < 1:3000281/101‑1 (MQ=255)
cTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCG.GGGGGA.A.TTTGGGGCAGGTAAAAgg > 1:5006476/1‑101 (MQ=255)
cTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAggg < 1:2058692/101‑1 (MQ=255)
cATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTGGGGGAAGGTAAAGGGgc > 2:3628881/1‑101 (MQ=255)
cATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.TTTTGGGGGAGAAAAAagggg > 1:1548361/1‑100 (MQ=255)
tGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.TTTGGGGGGAGAGAAAagggggt > 1:1754489/1‑98 (MQ=255)
tGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGgctt < 2:4359438/101‑1 (MQ=255)
ggcggcGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAG.A.TTTTGGGGAAGAAAAAagggggtt > 1:407399/1‑97 (MQ=255)
gcggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGgctttg < 2:4028095/101‑1 (MQ=255)
ggcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGA.A.TTTGGGGGGAGAGAAAAGGggttttct > 2:4152322/1‑101 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGgctttgctt < 2:1619482/101‑1 (MQ=255)
gcgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGgctttgctt < 2:3994178/101‑1 (MQ=255)
cgACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGgctttgcttt < 1:4642595/101‑1 (MQ=255)
ggcccTACACGGCGCGACCAGCCTTCGAAAGTCAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCtttt < 1:1654998/99‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCtttt < 1:2979583/101‑1 (MQ=255)
gACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCtttt < 1:349122/101‑1 (MQ=255)
cccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTAt < 2:2996944/101‑1 (MQ=255)
ccTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATc < 2:4331830/101‑1 (MQ=255)
cTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCt < 2:1760969/101‑1 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCGGGGGGAT.T.TTTGGGGAGAGA.AAAGGGGGTTTGTtttttttt > 1:3425857/1‑97 (MQ=255)
tACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCtt < 1:2243878/101‑1 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGCG.GGGGGG.A.TTTTGGGCAAGATAAAGGGGGTTTGCTTTTTTTtttt > 2:1039420/1‑100 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTTGGGGAAGATAAAAGGGGGTTGCTTTTTTTttttc > 2:3792377/1‑99 (MQ=255)
acGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTcc < 1:1148532/101‑1 (MQ=255)
ggCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.ATTTTGGGGGAGAAAAAAGGGGGTTTTTTTTTTTTTTTccc > 2:888447/1‑101 (MQ=255)
gcgcGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCa < 2:3155418/101‑1 (MQ=255)
cgcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCaa < 2:2543669/101‑1 (MQ=255)
cgcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCaa < 1:4628594/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCaaa < 1:1883268/101‑1 (MQ=255)
gcgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCaaa < 1:2906838/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAat < 1:3604260/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAat < 1:3629152/101‑1 (MQ=255)
cgACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAat < 1:4116894/101‑1 (MQ=255)
gatctgCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAata < 1:3813104/96‑1 (MQ=255)
gACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAata < 2:81888/101‑1 (MQ=255)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAata.t < 2:3304209/101‑1 (MQ=255)
aCCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAata.t < 1:183013/101‑1 (MQ=255)
ccAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.Tc < 1:1710083/101‑1 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTTGGGGAAGAAAAAGGGGCTTTTCTTTTTTCTTTTCCCAAATA.Accc > 2:2427525/1‑101 (MQ=255)
aGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.Tccc < 1:1423925/101‑1 (MQ=255)
gCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCg < 1:4185465/101‑1 (MQ=255)
cTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.TTTGGGGGAAGATAAAAGGGGTTTGCTTTTTTTTTTTCCCCAATA.Ttcccg > 2:58019/1‑99 (MQ=255)
cTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGA.A.ATTGGGGGAAGATAAAAGGGGTTTGGTTTTTTTTTTTCCCCAAAA.Tccccg > 1:310002/1‑99 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCgggg < 2:2177771/101‑1 (MQ=255)
ttCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGACTTTGCTTTTATCTTTCCCGAAata.tagatcgg > 1:4342312/1‑94 (MQ=38)
cGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.TTTTGGGGAAGAGAAAGGGGGGTTTCTTTTTTTTTTTCCCAAAAATTCCCggggg > 1:1223466/1‑101 (MQ=255)
gAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.TTTTGGGGAAGAAAAAAGGGCTTTTCTTTTTTTTTTTCCCCAATATTCCCgggggg > 1:4842912/1‑100 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTTGGGGAAGAAAAAAGGGCTTTGGTTTTTTTTTTCCCCAAATA.TCCCcggggggg > 1:1285374/1‑98 (MQ=255)
aaaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGGG.A.ATTGGGGGAAGATAAAGGGGCGTTGGTTTTTTCTTTTCCCAAAAA.TCCCCGGGGTgg > 2:3340810/1‑100 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCg < 2:2592837/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCg < 1:1399622/101‑1 (MQ=255)
aaGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCg < 2:1993926/101‑1 (MQ=255)
aGGAATTCGACCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTTGGGCAAGATAAAGGGGCTTTTCTTTTATTTTTTCCCAAATA.TTCCGGGGGGGCgggggg > 2:2042127/1‑100 (MQ=37)
gAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGCT.A.TTTTGGGGGAAATTAAGGGGGTTTGCGTTTATTTTTTTCCCAAGT.TTCCGCGGGTGGgggggggg > 1:4540588/1‑98 (MQ=255)
gAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCag < 2:1000350/101‑1 (MQ=255)
aaTTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTTGGGGAAGATAAAGGGGCTTTGCTTTTATCTTTTCCCCAAAA.TTCCGGGGGGGCGGGGGGaga > 2:274764/1‑101 (MQ=37)
aaTTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCaga < 1:1591640/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCagag < 1:3782755/101‑1 (MQ=255)
aTTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCagag < 1:3876844/101‑1 (MQ=255)
cGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGGAAGATAAAGGGGCTTTGCTTTTTTCTTTTCCCCAATA.TCCCGGGGGTGGGGGGGCAGAGccc > 2:3826685/1‑101 (MQ=25)
ggCCTGCGGCCGATGCCTCCGGC..GGGGGT.A.TTTTGGGGGAGAAAAAAGGGGGTTGCTTTTTTTTTTTCCCCAAAA.TCCCCGGGGGGGGGGGGGCGGGcccc > 1:108597/1‑101 (MQ=255)
ggCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTTTTTTTTCCCCAATA.TTCCCGGGGGGCGGGGGCAGAGcccc > 2:1023233/1‑101 (MQ=25)
ggCCGGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGcccc < 2:2148623/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGccccc < 2:224724/101‑1 (MQ=255)
gCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGccccc < 1:599897/101‑1 (MQ=255)
gtgactttcGATGCCTCCGGC..GGGGAT.A.TTTTGGGGAAAATGAA.AACCACCCCTTTCATTTTTCCCCAAATA.TCCCCGGGGGCCCGGGGGGGAGcgccccc > 1:3346418/9‑99 (MQ=25)
cTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGGAAGATAAAGGGGCTTTGCTTTTATCTTTTCCCCAATA.TCCCGGGGGGGCGGGGGGAGAGCCCCcgc > 2:3028945/1‑101 (MQ=37)
cGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGCCCCcgccgc > 2:4210368/1‑98 (MQ=255)
ggCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGGGCGGGGGCAGAGcgccccccccc > 2:3673349/1‑95 (MQ=21)
caagCCTCCCCC..CGGGAT.A.TTTGCGGCAAGATGAA.GGACATCGGCTTCATCTTGCCGCAAATA.TCCCCGGGGCCTGGGGGCAGAGCCCCCgggctccccga > 1:4906140/4‑94 (MQ=21)
aTGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGAAAAAAGGGCTTTGCTTTTTTCTTTCCCCAAATA.TCCCGGGGGGGCGGGGGCAGAGCCCCcgccgcccccgt > 1:4723204/1‑92 (MQ=18)
c..ggGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGCCCC..CGCCGCCACGGTTCACGCcgcg > 2:2758396/1‑101 (MQ=255)
|
CGGAGAAAGTGACGGTGGCAGGCAGGCTCATGGCGGCGACCCTACACGGCGCGACCAGCTTTCGAAAGACAGGAATTCGGCCTGCGGCCGATGCCTCCGGC..GGGGAT.A.TTTGGGGCAAGATAAAGGGGCTTTGCTTTTATCTTTCCCCAAATA.TCCCGGGGGTGCGGGGGCAGAGCCCCCGCGCCGCCACGGTTCACGCCGCG > NC_014034/3439667‑3439869
Base quality scores:
ATCG
< 3 ≤
ATCG
< 18 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|