| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 3,609,108 | +G | 98.1% | intergenic (+47/‑124) | clpB → / → dinB | chaperone ClpB/DNA polymerase IV |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 3,609,108 | 1 | .→G | 98.1% | 6.5 ‑0.4 ‑0.8 | 267 | intergenic (+47/‑124) | clpB/dinB | chaperone ClpB/DNA polymerase IV |
| Reads supporting (aligned to +/- strand): new base (124/138): ref base (3/2): total (127/140) | ||||||||||
| Fisher's exact test strand distribution p-value = 6.71e-01 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 1.56e-01 | ||||||||||
Only 100 of 288 total aligned reads displayed.
CAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GT.GGG.GGCTCTG.CCCC.C..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.GGGGCAGCGCCCCCTCCCCCAC > NC_014034/3609010‑3609202
|
cAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGAGGG.GGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATAttt < 2:1482605/101‑1 (MQ=38)
ggTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTT.g.gg < 2:3761370/101‑1 (MQ=39)
tctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTT.g.gggc < 2:2154309/101‑3 (MQ=38)
tctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGCGATATTT.g.gggc > 2:1225075/1‑99 (MQ=255)
gtcGGCCAGCCAGCGCGTCGAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTT.g.gggca < 1:2827547/100‑4 (MQ=38)
ctcGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTT.g.gggca < 1:141238/101‑4 (MQ=38)
gccagccaGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGt < 1:715052/101‑1 (MQ=38)
gccagccaGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGt < 2:3254661/101‑1 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 1:1583446/101‑1 (MQ=38)
ccagccagCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTa < 2:43565/101‑1 (MQ=38)
ggcccgcGCGTCCAGCCCGACCCGCGCGTGCGGAACGGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 1:4277350/100‑1 (MQ=21)
agccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTaaa < 2:4785314/101‑1 (MQ=38)
ccagcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAg < 1:2516659/101‑1 (MQ=38)
agcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCa > 1:1690956/1‑101 (MQ=37)
agcGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GT.GGGAGGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCa > 1:401153/1‑101 (MQ=38)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 1:946540/101‑1 (MQ=38)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 2:2752134/101‑1 (MQ=38)
cgcgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCAtt < 2:1910861/101‑1 (MQ=38)
cgTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGc > 2:4703255/1‑101 (MQ=37)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 2:3948631/1‑101 (MQ=37)
gTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGcc > 1:1094674/1‑101 (MQ=37)
tCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTG.CCCCTC..GCTTGGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGccc < 2:805300/101‑1 (MQ=37)
cAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCtt < 2:1061799/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt < 2:3674860/101‑1 (MQ=38)
aGACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCttt < 1:4283575/101‑1 (MQ=38)
gACCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTa < 2:1685249/101‑1 (MQ=38)
aCCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTAt < 1:4900246/101‑1 (MQ=38)
aCCGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTAt < 2:3648804/101‑1 (MQ=38)
ccGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATc < 1:1240502/101‑1 (MQ=38)
cGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt > 2:4178654/1‑101 (MQ=37)
cGAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt < 2:725444/101‑1 (MQ=38)
cGAACCGCGCGTGCTGAACTGATACGGAA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCt > 1:3286460/1‑101 (MQ=37)
gAACCGCGCGTGCTGAACTGATGCGGGAGGG.GGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 2:4241743/101‑1 (MQ=37)
gAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt > 1:3559239/1‑101 (MQ=37)
gAACCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCtt < 1:878346/101‑1 (MQ=38)
aaCCGCGCGTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTg < 2:2068686/101‑1 (MQ=38)
cgcgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCt > 2:3839475/1‑101 (MQ=37)
cgcgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCt < 2:87254/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 1:4536235/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 2:1859076/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 1:411245/101‑1 (MQ=38)
cgcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCa < 2:1163217/101‑1 (MQ=38)
gcgTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAg < 1:4331064/101‑1 (MQ=38)
gTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATCTTTGG.GGCCAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat > 1:641775/1‑101 (MQ=255)
gTGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGat > 1:1143757/1‑101 (MQ=37)
tGCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGata < 1:3850890/101‑1 (MQ=38)
gCTGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGatat > 2:3176437/1‑101 (MQ=37)
tGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATcc > 1:1625083/1‑101 (MQ=37)
tGAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATcc > 2:4068072/1‑101 (MQ=37)
gAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc < 1:391324/101‑1 (MQ=37)
gAACTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATccc > 1:4092474/1‑101 (MQ=37)
aaCTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCg > 1:4648606/1‑101 (MQ=37)
aaCTGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCg < 2:66249/101‑1 (MQ=37)
tGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgggg > 2:4108474/1‑101 (MQ=37)
tGATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCgggg > 1:689944/1‑101 (MQ=37)
gATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggggg > 1:3129004/1‑101 (MQ=37)
gATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggggg > 1:2679776/1‑101 (MQ=37)
gATACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCggggg > 2:285213/1‑101 (MQ=37)
aTACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGt > 2:1378885/1‑101 (MQ=37)
tACGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTg > 1:1495339/1‑101 (MQ=37)
aCGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGa > 2:4523729/1‑101 (MQ=25)
cGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGaa < 1:1320667/101‑1 (MQ=37)
cGGGA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGaa < 1:423510/101‑1 (MQ=37)
gggA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAt < 1:3038769/101‑1 (MQ=37)
gggA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAt < 1:4703578/101‑1 (MQ=37)
ggA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtt < 2:1752122/101‑1 (MQ=37)
ggA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtt > 1:2325443/1‑101 (MQ=25)
ggA.GTGGGG.GGCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtt < 2:2233188/101‑1 (MQ=37)
gagtgggg.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAttt < 1:1568100/96‑1 (MQ=37)
agtgggg.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtttt > 2:4635445/5‑101 (MQ=37)
agtgggg.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAAtttt < 1:78397/97‑1 (MQ=37)
ggg.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcg > 2:554301/1‑101 (MQ=37)
gg.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGgcgc < 1:4208580/101‑1 (MQ=38)
g.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCa > 2:4413689/1‑101 (MQ=37)
g.ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCa > 1:3497494/1‑101 (MQ=37)
ggCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAg < 1:895090/101‑1 (MQ=38)
gCTCTGCCCCC.C..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGc > 2:1118884/1‑101 (MQ=37)
gCTCTG.CCCC.CCGGCTTCGCTCCCCCCGGGATATTT.GCGGCAAGATGAAGGGGCATGATTTCATCTTGCCCGAAATATCCCAGGGGTGAAttggccaaagg < 2:3427407/101‑10 (MQ=2)
tctgccccc.c..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCa > 2:2315341/6‑101 (MQ=255)
ctgccccc.c..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCaa > 2:3354574/5‑101 (MQ=255)
ccccc.c..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAag < 1:3839760/100‑1 (MQ=255)
ccc.c..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAaga.g > 1:1907978/1‑101 (MQ=255)
c..GCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.gggg > 1:4987554/1‑101 (MQ=255)
gCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.ggggg < 1:582306/101‑2 (MQ=255)
gCTTCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.ggggg < 2:2613284/101‑2 (MQ=255)
tCGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.gggggcag < 2:1446511/101‑5 (MQ=255)
cGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.gggggcagc < 1:4480640/101‑6 (MQ=255)
cGCTCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.gggggcagc < 1:2054331/101‑6 (MQ=255)
tCCCCCCGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGcc < 1:3371510/101‑1 (MQ=21)
ccccGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTACCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGccccc > 2:2239119/1‑101 (MQ=21)
ccGGGATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTc < 2:4047175/101‑1 (MQ=21)
gggATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTccc < 1:822153/101‑1 (MQ=21)
ggATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTcccc > 1:3211534/1‑101 (MQ=18)
gATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTccccc > 2:3052006/1‑101 (MQ=21)
gATATTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTccccc < 2:2898692/101‑1 (MQ=18)
atatTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTCCCCCa > 2:4880312/1‑101 (MQ=21)
atatTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTCCCCCa > 2:1260610/1‑101 (MQ=18)
atatTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGGGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTCCCCCa > 1:2141520/1‑101 (MQ=18)
tatTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTCCCCCAc > 1:3642613/1‑101 (MQ=18)
tatTTGG.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGAGGGGGCAGCGCCCCCTCCCCCAc > 1:4399760/1‑101 (MQ=21)
|
CAAGGTCTCGGCCAGCCAGCGCGTCCAGACCGAACCGCGCGTGCTGAACTGATACGGGA.GT.GGG.GGCTCTG.CCCC.C..GCTTCGCTCCCCCCGGGATATTT.G.GGCAAGGTAAAAGCATTGCCCTTTATCTTGCCTCAGATATCCCGGGGGTGAATTTTGGCGCAGCCAAAAGA.GGGGCAGCGCCCCCTCCCCCAC > NC_014034/3609010‑3609202
Base quality scores:
ATCG
< 3 ≤
ATCG
< 20 ≤
ATCG
< 29 ≤
ATCG
< 34 ≤
ATCG
< 41 ≤
ATCG
|