| Predicted mutation | |||||||
|---|---|---|---|---|---|---|---|
| evidence | seq id | position | mutation | freq | annotation | gene | description |
| RA | NC_014034 | 979,300 | +G | 2.3% | intergenic (‑39/‑167) | RCAP_rcc00891 ← / → RCAP_rcc00892 | hypothetical protein/hypothetical protein |
| Read alignment evidence... | ||||||||||
|---|---|---|---|---|---|---|---|---|---|---|
| seq id | position | change | freq | score | reads | annotation | genes | product | ||
| * | NC_014034 | 979,300 | 1 | .→G | 2.3% | 2.3 ‑2.4 ‑0.4 | 132 | intergenic (‑39/‑167) | RCAP_rcc00891/RCAP_rcc00892 | hypothetical protein/hypothetical protein |
| Reads supporting (aligned to +/- strand): new base (3/0): ref base (57/72): total (60/72) | ||||||||||
| Fisher's exact test strand distribution p-value = 9.13e-02 | ||||||||||
| Kolmogorov-Smirnov test that lower quality scores support polymorphism than reference p-value = 4.14e-01 | ||||||||||
Only 100 of 198 total aligned reads displayed.
GCCAGCCACCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAGTGTC > NC_014034/979200‑979400
|
gccagccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCa > 1:2822724/1‑101 (MQ=255)
ccagccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.g > 1:3238768/1‑101 (MQ=255)
ccagccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGGCGCGGGGTTGGCACAGCA.TTGCGGCA.g > 2:563792/1‑101 (MQ=255)
cagccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.gg < 1:3478070/101‑1 (MQ=255)
cagccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGGCGCGGGGTTGGCACAGCA.CTGCGGCA.gg > 2:75593/1‑101 (MQ=255)
gccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGcc < 2:2533997/101‑1 (MQ=255)
ccaCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGGCGCGGGGGTGGCACAGCA.TTGCGGCA.GGGC.g > 2:2628455/1‑101 (MQ=255)
caCCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.gg < 2:4391711/101‑1 (MQ=255)
ccGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.gggg < 2:590051/101‑1 (MQ=255)
ccGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGCACAGCA.TTGCGGCA.GGGC.gggg > 1:2635139/1‑101 (MQ=255)
cGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.ggggg > 1:888895/1‑101 (MQ=255)
ggCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGGACAGCA.TTGCGGCA.GGGC.ggggggg > 2:3480336/1‑100 (MQ=255)
gCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGaa < 1:3390262/101‑1 (MQ=255)
gCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGCACAGCA.TTGCGGCA.GGGC.ggggggga > 1:3869198/1‑99 (MQ=255)
cGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.gggggggga > 1:2114324/1‑98 (MQ=255)
gAAAACGCCGGCGCGGAAGGAAAGGTGGGGGCGGGCAGGGGGGATCATTACGGCTCGCGACGCCGGGGGTGGCCCGGCATTTGAGGC..GGCC.GCGGGGCAAg > 2:1261902/1‑101 (MQ=255)
aaaaCGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.c < 1:3889187/101‑1 (MQ=255)
aaaCGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.Ca < 1:1851104/101‑1 (MQ=255)
aaCGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.Caa < 1:1123808/101‑1 (MQ=255)
cGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATg < 1:853866/101‑1 (MQ=255)
cGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCCGCA.GGCC.GGGGGGGAAG.GAAAGCCt > 1:2700504/1‑101 (MQ=255)
gcgcGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTc < 2:2700319/101‑1 (MQ=255)
cgcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTcc < 2:4833535/101‑1 (MQ=255)
cgcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTcc < 1:4581455/101‑1 (MQ=255)
gcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTccc < 1:2006502/101‑1 (MQ=255)
gcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTccc < 2:1963682/101‑1 (MQ=255)
gcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTccc < 2:3360229/101‑1 (MQ=255)
gcgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTccc < 2:2477470/101‑1 (MQ=255)
atctaaGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTccc < 1:3995833/97‑1 (MQ=255)
cgGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGGAG.CAAAGGCCTcccc > 1:383821/1‑100 (MQ=255)
gAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAGCCAAGGCCTTccgcc > 2:4709809/1‑98 (MQ=255)
gAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGCACAGCA.TTGCGGCAGGGCC.GGGGGGAAA..CAAAGCCCTCccccc > 2:2069714/1‑101 (MQ=255)
aaGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAG.CAAAGGCTTcccagat > 2:3995531/1‑97 (MQ=255)
aaGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCccgccg < 2:912511/101‑1 (MQ=255)
aGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCAGGGGG.GGGGGGAAAA.CAAGACCTCCcccccg > 1:3800371/1‑101 (MQ=255)
aGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAG.GAAAGCCTTCCCCCCgg > 1:1919870/1‑101 (MQ=255)
aGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAG.GAAAGCCCTCCCCCCgg > 1:4295766/1‑101 (MQ=255)
gACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAA.GAAAGCCCTCCCCCCgggg > 2:3012305/1‑99 (MQ=255)
gggggCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAG.GAAAGCCTTCCCCCCGGG.GGTTCggg > 1:3150186/1‑101 (MQ=255)
gggcgggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGGTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGGAAG.GAAAGGCTTCCCCCCCGTGGTTTCgggg > 2:657993/1‑100 (MQ=255)
gcgggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGc < 1:1847536/101‑1 (MQ=255)
ggggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGcc < 1:1826728/100‑1 (MQ=255)
cgggcAGGGCGGATCATCCCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGcc < 1:4772340/101‑1 (MQ=255)
gggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGcgcgag < 2:887263/101‑6 (MQ=255)
ggcAGGGCGGATCATCACGGCTCGCGGTCGGGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGt < 2:4252307/101‑1 (MQ=255)
ggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGGACAGCA.TTGCGGCA.GGGC.GGGGGGGAAG.CAATCCCCTTCCCCCCGT.GTTTCTGGCGTGCCg > 2:1791907/1‑101 (MQ=255)
ggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGGC.GGGGGGGAAA.CAATGCCCTCCCGCCGGG.GTTTCCGGG.TGcccg > 1:52419/1‑99 (MQ=255)
ggcAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGGAAG.GAAAGGCCTCCCCCCGGG.GGTTTggggcggcgg > 1:770513/1‑94 (MQ=255)
cAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCCGGGGGGGAAAG.AAAGGCC.TCCCGCCGGG.GGTTCGGGG.TGCCCTGc > 1:1182882/1‑101 (MQ=255)
ggCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGctct < 2:5045165/101‑1 (MQ=255)
gCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGctctc < 2:224865/101‑1 (MQ=255)
gCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGctctc < 1:1524913/101‑1 (MQ=255)
cGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGGAAG.CAATGGCTTCCCCCCGGT.GGTTCGGGC.TGCCGTGctctct > 1:107973/1‑101 (MQ=255)
gATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGGAAG.CAAAGCCTTCCCGCCGGG.GTTTCGGGC.TGCCGTGctctcttg > 2:1837739/1‑99 (MQ=255)
tcatcaCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCt < 2:3832877/101‑1 (MQ=255)
tcatcaCGGCCCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCt < 2:3323760/101‑1 (MQ=255)
catcaCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGGAAG.CAATGCCTTCCCGCCGGG.GTTTTGGGC.TGCCGTGCTCTCTGGCtt > 2:2026481/1‑100 (MQ=255)
catcaCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTa < 1:4726970/101‑1 (MQ=255)
atcaGGGCTGGCGGTCGCGGGGTGGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTAt < 2:4602263/101‑1 (MQ=255)
atcaCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTAt < 2:3800086/101‑1 (MQ=255)
tcaCGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATc < 2:1919733/101‑1 (MQ=255)
ccGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCgg < 1:3688204/100‑1 (MQ=255)
ggCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGG.GTTTCGGGG.TGCCGTGCTCTCTGGCTATCGGGc > 1:4384708/1‑101 (MQ=255)
tcgcggtcgcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAgg > 2:2415558/1‑101 (MQ=255)
cgcggtcgcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGG.GTTTCGGGA.TGCCGTGCTCTCTGGCTATCGGGCAGgc > 1:1413127/1‑101 (MQ=255)
gggtccgggggTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGgcgc < 2:2114176/94‑1 (MQ=255)
cggtcgcggGGTTGGCACAGCA.TTGCGGCG.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGgcgc < 1:2073998/101‑1 (MQ=255)
gtcgcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCCCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCCGGCAGGCGCAc > 1:2270977/1‑101 (MQ=255)
tcgcggGTTTGGCACAGCA.TTGCGGCA.GGCA.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCAcc < 2:4505453/101‑1 (MQ=255)
tcgcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGTAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCAcc < 1:1053332/101‑1 (MQ=255)
tcgcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCAcc > 2:1323761/1‑101 (MQ=255)
gcggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACcgc < 2:3238517/101‑1 (MQ=255)
cggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACcgcc > 2:1212856/1‑100 (MQ=255)
cggGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCAGGC.TCCCCTGCCCCCTGGCTATCGGCAAGGCCCAcccgg > 2:2277948/1‑98 (MQ=255)
ggTTGGCACAGCT.TTGCGGCA.GGCC.GGGGGGAAAG.CAAGCCCTCCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCgcgcgc < 2:2368776/101‑1 (MQ=255)
ggTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGGAGGCGCCCCgcgcgc > 1:1548762/1‑101 (MQ=255)
tGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCCCCGCGCGCCtt > 1:644273/1‑101 (MQ=255)
tGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCtt > 2:2524614/1‑101 (MQ=255)
tGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCtt < 1:4673031/101‑1 (MQ=255)
tGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCtt < 1:563871/101‑1 (MQ=255)
ggCACAGCA.TGGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTg < 1:2366650/101‑1 (MQ=255)
gCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGa > 1:3563643/1‑101 (MQ=255)
gCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGa < 2:3935898/101‑1 (MQ=255)
gCACAGCA.TGGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGa < 2:3125419/101‑1 (MQ=255)
gCACAGCA.TGGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGa < 2:1384718/101‑1 (MQ=255)
ccaGCA.GTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGAcc < 2:2976998/100‑1 (MQ=255)
caGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCg < 1:295944/101‑1 (MQ=255)
gCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGG.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCCAg > 1:1760714/1‑101 (MQ=255)
ttGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTc < 2:107957/101‑1 (MQ=255)
ttGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTc < 2:2822511/101‑1 (MQ=255)
ttGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCAGGC.TGCCGTGCTCTCTGGCTATCGGGCACGAGCACCGCGCGCCTTGACCGAGGTc > 2:690265/1‑101 (MQ=255)
tGCGGCA.GGCG.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCa < 1:253763/101‑1 (MQ=255)
cGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAg > 1:3774696/1‑101 (MQ=255)
ggCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAgt > 1:738427/1‑101 (MQ=255)
ggCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAgt > 2:4917574/1‑101 (MQ=255)
ggCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCCCCCGCCTTGACCGAGGTCAAgt > 2:966772/1‑101 (MQ=255)
cA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAgtgt > 1:2362677/1‑101 (MQ=255)
a.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAGTGTc < 2:467891/101‑1 (MQ=255)
a.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAGTGTc > 2:1378698/1‑101 (MQ=255)
a.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAGTGTc > 1:1337978/1‑101 (MQ=255)
|
GCCAGCCACCGGGCGAAAACGCCGGCGCGGAAGGACAGCTGGGGGCGGGCAGGGCGGATCATCACGGCTCGCGGTCGCGGGGTTGGCACAGCA.TTGCGGCA.GGCC.GGGGGGAAAG.CAATGCCTTCCCGCCGGT.GTTTCGGGC.TGCCGTGCTCTCTGGCTATCGGGCAGGCGCACCGCGCGCCTTGACCGAGGTCAAGTGTC > NC_014034/979200‑979400
Base quality scores:
ATCG
< 3 ≤
ATCG
< 15 ≤
ATCG
< 22 ≤
ATCG
< 32 ≤
ATCG
< 40 ≤
ATCG
|