New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1082177 =232 (1.100)2 (0.010) 2/172 27.7 0.01 coding (859/885 nt) RCAP_rcc00995 hypothetical protein
?NC_014034 = 3187112 224 (0.910)coding (533/831 nt) RCAP_rcc02997 phospholipid/glycerol acyltransferase
Rejected: Position hash score below cutoff.

CCGTCGTGGCTGACGAGATCGGCAAGGAAGTTGGCGAGGCCAAGGCGCGCTTCATCGCGCTGACGCCGAACGGCGTGACGATCGAGCGGCAGACGCAGCTGCTGCAGGTGCTGC....................................................................................................  <  NC_014034/1082290‑1082177
....................................................................................................GCTGCAGGTGCTGCCGTTCAAGACGACGCTCTTTGCCGCCTTTTACACCCACGGGCTCGACAAGGTGATGCAGATCCAGCCGGTCACGGTGAATTACACCGCGCCCGAGGGCGA  <  NC_014034/3187112‑3187013
                                                                                                                                                                                                                      
                                   GAGGCCAAGGCGCGCTTCATCGCGCTGACGCCGAACGGCGTGACGATCGAGCGGCAGACGCAGCTGCTGCAGGTGCTGCCGTTCAAGACGACGCTCTTTGC                                                                                >  1:4830907/1‑101 (MQ=255)
                                                               CGCCGAACGGCGTGACGATCGAGCGGCAGACGCAGCTGCTGCAGGTGCTGCCGTTCAAGACGACGCTCTTTGCCGCCTTTTACACCCACGGGCTCGACAAG                                                    <  2:4830580/101‑1 (MQ=255)
                                                                                                                                                                                                                      
CCGTCGTGGCTGACGAGATCGGCAAGGAAGTTGGCGAGGCCAAGGCGCGCTTCATCGCGCTGACGCCGAACGGCGTGACGATCGAGCGGCAGACGCAGCTGCTGCAGGTGCTGC....................................................................................................  <  NC_014034/1082290‑1082177
....................................................................................................GCTGCAGGTGCTGCCGTTCAAGACGACGCTCTTTGCCGCCTTTTACACCCACGGGCTCGACAAGGTGATGCAGATCCAGCCGGTCACGGTGAATTACACCGCGCCCGAGGGCGA  <  NC_014034/3187112‑3187013

Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG