New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 11206	254 (1.110)	2 (0.010)	2/186	28.7	0.01	coding (144/1017 nt)	flgL	flagellar hook‑associated protein FlgL
	?	NC_014034	= 676321	217 (0.890)					coding (999/1128 nt)	menC	O‑succinylbenzoic acid synthetase
Rejected: Position hash score below cutoff.

ATCTGATGCGGCGTCACAATGTTCAGCTGAAGACGACGATGTCGCGGCTCTCGGAAGAGGTCGTCACCGGCATCAGCCAGGATCTGGGCACCAAGGTCGGCGGCGAT....................................................................................................  >  NC_014034/11100‑11206 ....................................................................................................CGGCGATGATGTCGCGGTGGAAATAGCGGCTGGCCGAGGAAGTGTCGCCCGGTTTGGTGAAATTCGGCAAGGTTGCCAGATGGATGTTATGCGCCCGGCCGATCCCG  <  NC_014034/676321‑676222                                                                                                                                                                                                                                                          atctGGCTCTCGGAAGAGGTCGTCACCGGCATCAGCCAGGATCTGGGCACCAAGGTCGGCGGCGATGATGTCGCGGTGGAAATAGCGGCTGGCCGAGGAAG                                                                   <  1:1830989/97‑1 (MQ=255)                                              GGCTCTCGGAAGAGGTCGTCACCGGCATCAGCCAGGATCTGGGCACCAAGGTCGGCGGCGATGATGTCGCGGTGGAAATAGCGGCTGGCCGAGGAAGagat                                                               >  2:1830856/1‑97 (MQ=255)                                                                                                                                                                                                                 ATCTGATGCGGCGTCACAATGTTCAGCTGAAGACGACGATGTCGCGGCTCTCGGAAGAGGTCGTCACCGGCATCAGCCAGGATCTGGGCACCAAGGTCGGCGGCGAT....................................................................................................  >  NC_014034/11100‑11206 ....................................................................................................CGGCGATGATGTCGCGGTGGAAATAGCGGCTGGCCGAGGAAGTGTCGCCCGGTTTGGTGAAATTCGGCAAGGTTGCCAGATGGATGTTATGCGCCCGGCCGATCCCG  <  NC_014034/676321‑676222 Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG