New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1125990168 (0.710)2 (0.010) 2/192 29.2 0.01 coding (232/1044 nt) RCAP_rcc01046 iron siderophore/cobalamin ABC transporter permease
?NC_014034 = 3188830 224 (0.910)coding (49/633 nt) RCAP_rcc03000 hypothetical protein
Rejected: Position hash score below cutoff.

CAAGCGTGTAGGGGCTGGCCATCGGGTTGTTCAAAAGCGTCTGGATCTCGGCCCCGCCGACCCCCAGGGCCGCCCCGGCGACCAGCGCCATCAGGGCCATCGG....................................................................................................  >  NC_014034/1125888‑1125990
...................................................................................................TCGGAAGGCGCGGTCTCGGGCGGCGGGGCAGGGACGAAGGCTTCATGGGTCATGGTGGATCTCCCTTTCGGGGGTCGCCGAAGCGAGGGCAGGATGAACGCGTT  <  NC_014034/3188830‑3188731
                                                                                                                                                                                                           
                                          GGATCTCGGCCCCGCCGACCCCCAGCGCCGCCCCGGCGACCAGCGCCATCAGGGCCATCGGAAGGCGCGGTCTCGGGCGGCGGGGCAGGGACGAAGGCTTC                                                              >  1:3948145/1‑101 (MQ=255)
                                               TCGGCCCCGCCGACCCCCAGCGCCGCCCCGGCGACCAGCGCCATCAGGGCCATCGGAAGGCGCGGTCTCGGGCGGCGGGGCAGGGACGAAGGCTTCATGGG                                                         <  2:3947853/101‑1 (MQ=255)
                                                                                                                                                                                                           
CAAGCGTGTAGGGGCTGGCCATCGGGTTGTTCAAAAGCGTCTGGATCTCGGCCCCGCCGACCCCCAGGGCCGCCCCGGCGACCAGCGCCATCAGGGCCATCGG....................................................................................................  >  NC_014034/1125888‑1125990
...................................................................................................TCGGAAGGCGCGGTCTCGGGCGGCGGGGCAGGGACGAAGGCTTCATGGGTCATGGTGGATCTCCCTTTCGGGGGTCGCCGAAGCGAGGGCAGGATGAACGCGTT  <  NC_014034/3188830‑3188731

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG