New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1214798 =229 (1.040)2 (0.010) 2/180 28.3 0.01 coding (356/2835 nt) gcvP glycine dehydrogenase
?NC_014034 = 2922680 206 (0.840)coding (20/2556 nt) RCAP_rcc02735 virulence‑associated protein E
Rejected: Position hash score below cutoff.

CTCGGCGGCGGCGGTCGATTCATCGAGCAGCGAGGCATTCGCCACCGGCAGGCCAGTCAGATCGGCGACCATGGTCTGATAGTTCAGCAGCGCCTCCAGCCGGCCTTGCG....................................................................................................  <  NC_014034/1214907‑1214798
....................................................................................................CGGCCTTGCGATATCGTTGAGATCGATCATCGCGCCCCCTCACGCAAGGAGGACCAGCCCGCGCTCGGCGCGGGTGATGGCGGTGTAGAGCCAGCGGCGGCGGTCCATCT  <  NC_014034/2922680‑2922581
                                                                                                                                                                                                                  
                                    ATTCGCCACCGGCAGGCCAGTCAGATCGGCGACCATGGTCTGATAGTTCAGCAGCGCCTCCAGCCGGCCTTGCGATATCGTTGAGATCGATCATCGCGCCC                                                                           >  2:3586203/1‑101 (MQ=255)
                                        GCCACCGGCAGGCCAGTCAGATCGGCGACCATGGTCTGATAGTTCAGCAGCGCCTCCAGCCGGCCTTGCGATATCGTTGAGATCGATCATCGCGCCCCCTC                                                                       <  1:3586474/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CTCGGCGGCGGCGGTCGATTCATCGAGCAGCGAGGCATTCGCCACCGGCAGGCCAGTCAGATCGGCGACCATGGTCTGATAGTTCAGCAGCGCCTCCAGCCGGCCTTGCG....................................................................................................  <  NC_014034/1214907‑1214798
....................................................................................................CGGCCTTGCGATATCGTTGAGATCGATCATCGCGCCCCCTCACGCAAGGAGGACCAGCCCGCGCTCGGCGCGGGTGATGGCGGTGTAGAGCCAGCGGCGGCGGTCCATCT  <  NC_014034/2922680‑2922581

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG