New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1217374 =	178 (0.740)	8 (0.030)	4/194	27.2	0.04	intergenic (+97/+131)	gcvP/fabH1	glycine dehydrogenase/3‑oxoacyl‑ACP synthase III
	?	NC_014034	1473410 =	208 (0.850)					intergenic (+117/+102)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
Rejected: Position hash score below cutoff.

CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCC..................................................................................................  <  NC_014034/1217473‑1217374 ......................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGC  >  NC_014034/1473410‑1473505                                                                                                     ||                                                                                                 CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCG                                                                                                   <  1:380725/101‑1 (MQ=32)   GCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCCCCGCG                                                                                                 >  2:478497/1‑101 (MQ=17)       TTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGGGCCCGTCCCGGCGGGCGAGAAACGCCCGCCCCGGGCG                                                                                             >  1:4946989/1‑101 (MQ=255)         CCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGGGAAGCGCCCGCCGGGGGCGGG                                                                                           >  1:3476917/1‑101 (MQ=0)            CGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCCGCCCGGCGGGGGAGAAGCGCCCGCCGCGGGCGGGGCG                                                                                        >  2:1747358/1‑101 (MQ=255)                 GTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCGCAGGCGGGGCGGGGGC                                                                                   >  1:3078591/1‑101 (MQ=12)                  TCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGCACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCCGGGGGCGGGGCGGGgggc                                                                                  >  2:2193736/1‑97 (MQ=0)                                                                                          cggccCCCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCA          <  1:4864958/96‑1 (MQ=17)                                                                                              cCCCGCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAA      <  1:4062438/100‑1 (MQ=17)                                                                                                  GCCGGGGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGC  <  1:4547315/101‑1 (MQ=32)                                                                                                     ||                                                                                                 CTGCCTTTCCCCGCCCGTCAGTGCAACGCCGCCCCAAGACCGTTTGCCCCAAGCCCGAACAGAGGCCGGCGCCCGTCCCGGCGGGCGAGAAGCGCCCGCC..................................................................................................  <  NC_014034/1217473‑1217374 ......................................................................................................GGGCGGGGCGGGCGCTGGCCGAGGGCCTTTGGGCCCCCGGCGGTCACGGGGCAAATGTCGCGCATGACCTCGGCGATGGCCTCGGTCAAAAAGGGC  >  NC_014034/1473410‑1473505 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG