New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 127587 =256 (1.120)4 (0.020) 3/186 27.7 0.02 coding (385/1689 nt) RCAP_rcc00121 family 14 glycosyl transferase
?NC_014034 1200349 = 215 (0.880)coding (230/672 nt) trpF phosphoribosylanthranilate isomerase
Rejected: Position hash score below cutoff.

TCTCGCTTCGGGCGCCTGTCTGCCGCTGCGGCCGCTGCATGAGCTGGCCGAGTATCTGGCCGCCCGTCCGGGCACCGATTTCATCGAAAGCGTCACCACCGCCGAGG....................................................................................................  <  NC_014034/127693‑127587
....................................................................................................GCCGAGGACGCGGATCTGGAGGCGATCACCGCCTCGGTGCCGCTCGACATGCTGCAACTTCATGGGCGCGAAAGCCCGGCCCGGGTGGCCGAGGTGAAGGCGCGGTT  >  NC_014034/1200349‑1200448
                                                                                                                                                                                                               
         GGGCGCCTGTCTGCCGCTGCGGCCGCTGCATGAGCTGGCCGAGGATCTGGCCGCCCGTCCGGGCACCGATTTCATCGAAAGCGTCACCACCGCCGCGGGCG                                                                                                   >  2:1110114/1‑101 (MQ=255)
                                   TGCATGAGCTGGCCGAGTATCTGGCCGCCCGTCCGGGCACCGATTTCATCGAAAGCGTCACCACCGCCGAGGACGCGGATCTGGAGGCGATCACCGCCTCG                                                                         >  1:4121003/1‑101 (MQ=255)
                                                      TCTGGCCGCCCGTCCGGGCACCGATTTCATCGAAAGCGTCACCACCGCCGAGGACGCGGATCTGGAGGCGATCACCGCCTCGGTGCCGCTCGACATGCTGC                                                      <  2:4120686/101‑1 (MQ=255)
                                                                                                 gaCGCCGAGGACGCGGATCTGGAGGCGATCTCCGCCTCGGTGCCGCTCGACATGCTGCAACTTCATGGGCGCGAAAGCCCGGCCCGGGTGGCCGAGGTGAA           <  2:1580296/99‑1 (MQ=255)
                                                                                                                                                                                                               
TCTCGCTTCGGGCGCCTGTCTGCCGCTGCGGCCGCTGCATGAGCTGGCCGAGTATCTGGCCGCCCGTCCGGGCACCGATTTCATCGAAAGCGTCACCACCGCCGAGG....................................................................................................  <  NC_014034/127693‑127587
....................................................................................................GCCGAGGACGCGGATCTGGAGGCGATCACCGCCTCGGTGCCGCTCGACATGCTGCAACTTCATGGGCGCGAAAGCCCGGCCCGGGTGGCCGAGGTGAAGGCGCGGTT  >  NC_014034/1200349‑1200448

Base quality scores:  ATCG  < 3 ≤  ATCG  < 12 ≤  ATCG  < 23 ≤  ATCG  < 30 ≤  ATCG  < 38 ≤  ATCG