New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1300672231 (1.040)2 (0.010) 2/182 28.4 0.01 coding (1606/1977 nt) urtA urea ABC transporter permease UrtA
?NC_014034 2043559 = 239 (0.980)coding (1250/1818 nt) typA GTP‑binding protein TypA/BipA
Rejected: Position hash score below cutoff.

GCGATCAGCTATATCCGCATTGCCATCTTCGTGCTGGCGCTCGCCTTCCTTGGCCTTTTCCTTCTGGTGATGAAACGCACCCGCCTCGGCCTTGAAGTCCGCGCGGTGA....................................................................................................  >  NC_014034/1300564‑1300672
....................................................................................................GCGCGGTGATCGAGAAACTGACTGGGCCTCGCAAGGGCGATCTGGTCGAGATGCGCCCCGCCGGTCACGGCAAGACCCGGATCGTCGCCCATGTGCCCTCGCGCGGCCT  >  NC_014034/2043559‑2043658
                                                                                                                                                                                                                 
                                 CTGGCGCTCGCCTTCCTTGGCCTTTTCCTTCTGGTGATGAAACGCACCCGCCTCGGCCTTGAAGTCCGCGCGGTGATCGAGAAACTGACTGGGCCTCGCAA                                                                             >  1:1313691/1‑101 (MQ=255)
                                                    GCCTTTTCCTTCTGGTGATGAAACGCACCCGCCTCGGCCTTGAAGTCCGCGCGGTGATCGAGAAACTGACTGGGCCTCGCAAGGGCGATCTGGTCGAGATG                                                          <  2:1313570/101‑1 (MQ=255)
                                                                                                                                                                                                                 
GCGATCAGCTATATCCGCATTGCCATCTTCGTGCTGGCGCTCGCCTTCCTTGGCCTTTTCCTTCTGGTGATGAAACGCACCCGCCTCGGCCTTGAAGTCCGCGCGGTGA....................................................................................................  >  NC_014034/1300564‑1300672
....................................................................................................GCGCGGTGATCGAGAAACTGACTGGGCCTCGCAAGGGCGATCTGGTCGAGATGCGCCCCGCCGGTCACGGCAAGACCCGGATCGTCGCCCATGTGCCCTCGCGCGGCCT  >  NC_014034/2043559‑2043658

Base quality scores:  ATCG  < 3 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG