New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1370660210 (0.940)2 (0.010) 2/182 28.4 0.01 coding (40/2616 nt) RCAP_rcc01289 hypothetical protein
?NC_014034 2772659 = 212 (0.870)coding (1664/2412 nt) lon ATP‑dependent protease La
Rejected: Position hash score below cutoff.

GGCGGGGTGTCACGTTTTATCAGCTGCCTTTGCCATGCTATTGCCAAATCTGTATAATTTGTGAGCGCCATGAGACTGAGCCCGTTGCAGACTGCCTCGCCGGTGACCG....................................................................................................  >  NC_014034/1370552‑1370660
....................................................................................................CGGTGACCGAGATCCTCAAGGCCAAGGGCGCGGTGAAATCGGTCACGGTCGATGAGGCGAAGCTGGGCGATTATCTGGGCGTGAAGCGGCACCGCTATGGTCTGGCCGA  >  NC_014034/2772659‑2772758
                                                                                                                                                                                                                 
                                             atcTCTGTATAATTTGTGAGCGCCATGAGACTGAGCCCGTTGCAGACTGCCTCGCCGGTGACCGAGATCCTCAAGGCCAAGGGCGCGGTGAAATCGGTCAC                                                                 <  2:601949/98‑1 (MQ=255)
                                                 CTGTATAATTTGTGAGCGCCATGAGACTGAGCCCGTTGCAGACTGCCTCGCCGGTGACCGAGATCCTCAAGGCCAAGGGCGCGGTGAAATCGGTCACagat                                                             >  1:602028/1‑97 (MQ=255)
                                                                                                                                                                                                                 
GGCGGGGTGTCACGTTTTATCAGCTGCCTTTGCCATGCTATTGCCAAATCTGTATAATTTGTGAGCGCCATGAGACTGAGCCCGTTGCAGACTGCCTCGCCGGTGACCG....................................................................................................  >  NC_014034/1370552‑1370660
....................................................................................................CGGTGACCGAGATCCTCAAGGCCAAGGGCGCGGTGAAATCGGTCACGGTCGATGAGGCGAAGCTGGGCGATTATCTGGGCGTGAAGCGGCACCGCTATGGTCTGGCCGA  >  NC_014034/2772659‑2772758

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG