New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1396934	365 (2.190)	30 (0.180)	4/136	22.5	0.10	coding (816/1578 nt)	RCAP_rcc01307	hypothetical protein
	?	NC_014034	1397098 =	183 (0.750)					coding (980/1578 nt)	RCAP_rcc01307	hypothetical protein
Rejected: Position hash score below cutoff.

TCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC............................................................................  >  NC_014034/1396894‑1396934 .........................................................................TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCG  >  NC_014034/1397098‑1397141                                          ||||||||||||||||||||||||||||||||                                             gaacaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGAT                  <  2:917367/92‑1 (MQ=0) gaacaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGAT                  <  1:4626638/92‑1 (MQ=0) gaacaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGAT                  <  1:310441/92‑1 (MQ=0)  aacaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATC                 <  1:3547305/93‑1 (MQ=0)   acaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCG                <  1:648705/94‑1 (MQ=1)   acaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCG                <  2:4201886/94‑1 (MQ=1)   acaggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCG                <  1:2597771/94‑1 (MQ=1)    caggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGA               <  2:559334/95‑1 (MQ=1)     aggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAA              <  1:4619179/96‑1 (MQ=1)      ggatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGGTCGAAA             >  2:328716/5‑101 (MQ=1)      ggatGTCGCTCCCCCCGCGAGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATTGTCGCTCCCCCCGCGGGGGCGTGGATCGAAA             <  1:2841709/97‑1 (MQ=0)       gatGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCCCGGGGGCGTGGATCGAAAC            >  1:4187055/4‑101 (MQ=1)        atGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACG           <  2:3997987/99‑1 (MQ=1)        atGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGGGGGTCGAAACG           >  1:2967903/3‑101 (MQ=0)         tGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGg          <  1:631125/100‑2 (MQ=1)          GTCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCCCGGGGGCGGGGGTCGAAACGgg         >  1:1830242/1‑99 (MQ=0)           TCGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGGGGATCGAAACGggg        >  1:2073811/1‑98 (MQ=0)            CGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtc       <  1:2544229/101‑5 (MQ=1)            CGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtc       <  2:2562468/101‑5 (MQ=1)            CGCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCCCGGGGGCGTGGATCGAAACGgggg       >  2:2184247/1‑97 (MQ=0)             GCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcg      <  1:4200446/101‑6 (MQ=1)             GCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcg      <  2:4884037/101‑6 (MQ=1)             GCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcg      <  2:1481213/101‑6 (MQ=1)             GCTCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGgggcg      >  1:1579828/1‑96 (MQ=1)               cCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaa    <  2:4572235/100‑8 (MQ=0)               cCCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaa    <  1:2141492/100‑8 (MQ=0)                CCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaag   <  1:4959908/101‑9 (MQ=0)                CCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaag   <  2:4315229/101‑9 (MQ=0)                CCCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaag   <  2:559775/101‑9 (MQ=0)                 CCCCCGCGGGGGCGTGGATCGAAACTATGCTGGCTCGACCGAGTTCACGGCGGGCTATCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGggtcgaaga  <  1:1663391/101‑10 (MQ=0)                                          ||||||||||||||||||||||||||||||||                                             TCCTCAGACGTCGCTCCCCCCGCGGGGGCGTGGATCGAAAC............................................................................  >  NC_014034/1396894‑1396934 .........................................................................TCGTCGCTCCCCCCGCGGGGGCGTGGATCGAAACGTCCAGCTCG  >  NC_014034/1397098‑1397141 Base quality scores:  ATCG  < 3 ≤  ATCG  < 19 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG