New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 141035 =186 (0.820)2 (0.010) 2/186 28.7 0.01 coding (410/495 nt) RCAP_rcc00133 hypothetical protein
?NC_014034 = 3417631 247 (1.010)intergenic (+21/‑48) ruvA/ruvB holliday junction DNA helicase RuvA/holliday junction DNA helicase RuvB
Rejected: Position hash score below cutoff.

GGTCAACCGCTGCCGCAGGGCGCACCGGGCGGGTTCCTGGCCGGGGCGGTGCAGACGGCGATGGGGGTGGCGGGCGGCATGCTGCTGGCCAATGCCGTCGCCGGGAT....................................................................................................  <  NC_014034/141141‑141035
....................................................................................................CCGGGATATTTAAGGCAAGATGAAAAGGCTAGTCCTTTGGGGCGAGGAGGCGCAGGGCGGTGCGGATCAGTTTTGCGGTATCGGTGGCCTCGGGGTTCTCGCTGGCC  <  NC_014034/3417631‑3417532
                                                                                                                                                                                                               
                                    CTGGCCGGGGCGGTGCAGACGGCGATGGGGGTGGCGGGCGGCATGCTGCTGGCCAATGCCGTCGCCGGGATATTTAAGGCAAGATGAAAAGGCTAGTCCTT                                                                        <  2:1484503/101‑1 (MQ=255)
                                      GGCCGGGGCGGTGCAGACGGCGATGGGGGTGGCGGGCGGCATGCTGCTGGCCAATGCCGTCGCCGGGATATTTAAGGCAAGATGAAAAGGCTAGTCCTTag                                                                      >  1:1484633/1‑99 (MQ=255)
                                                                                                                                                                                                               
GGTCAACCGCTGCCGCAGGGCGCACCGGGCGGGTTCCTGGCCGGGGCGGTGCAGACGGCGATGGGGGTGGCGGGCGGCATGCTGCTGGCCAATGCCGTCGCCGGGAT....................................................................................................  <  NC_014034/141141‑141035
....................................................................................................CCGGGATATTTAAGGCAAGATGAAAAGGCTAGTCCTTTGGGGCGAGGAGGCGCAGGGCGGTGCGGATCAGTTTTGCGGTATCGGTGGCCTCGGGGTTCTCGCTGGCC  <  NC_014034/3417631‑3417532

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG