New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 142363235 (1.030)2 (0.010) 2/186 19.8 0.01 coding (528/1311 nt) RCAP_rcc00134 hypothetical protein
?NC_014035 = 42317 117 (0.850)coding (1036/1044 nt) RCAP_rcp00059 type 12 family methyltransferase
Rejected: Position hash score below cutoff.

CGACGACGCGATAATGATACCCCTCGTGCGCCTCTTCCTCGGCGTCATGGCCAAGGCCATGTTCCGGGGTGAATTCCGCGCCCAGCGGCAGCGGCACCCGGGCGCCC...................................................................................................  >  NC_014034/142257‑142363
....................................................................................................GGCGCCCCCCAGATGAACTTGCTCCCTCTGTTCGCCGCGCTGCTTCTTGGCCTGCCCGCCCCCCTGCGAGCCGAGGAAGTGATCCTGACCGGCCCGCCGATCTGGG  <  NC_014035/42317‑42219
                                                                                                                                                                                                              
                                             CATGGCCAAGGCCATGTTCCGGGGTGAATTCCGCGCCCAGCGGCAGCGGCACCCGGGCGCCCCCCAGATGAACTTGCTCCCTCTGTTCGCCGCGCTGCTTC                                                              >  1:3164039/1‑101 (MQ=255)
                                                                       AATTCCGCGCCCAGCGGCAGCGGCACCCGGGCGCCCCCCAGATGAACTTGCTCCCTCTGTTCGCCGCGCTGCTTCTTGGCCTGCCCGCCCCCCTGCGAGCC                                    <  2:3163788/101‑1 (MQ=255)
                                                                                                                                                                                                              
CGACGACGCGATAATGATACCCCTCGTGCGCCTCTTCCTCGGCGTCATGGCCAAGGCCATGTTCCGGGGTGAATTCCGCGCCCAGCGGCAGCGGCACCCGGGCGCCC...................................................................................................  >  NC_014034/142257‑142363
....................................................................................................GGCGCCCCCCAGATGAACTTGCTCCCTCTGTTCGCCGCGCTGCTTCTTGGCCTGCCCGCCCCCCTGCGAGCCGAGGAAGTGATCCTGACCGGCCCGCCGATCTGGG  <  NC_014035/42317‑42219

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG