New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	1473412 =	165 (0.840)	5 (0.030)	4/156	24.3	0.03	intergenic (+119/+100)	nadE/RCAP_rcc01367	NAD(+) synthase (glutamine‑hydrolyzing)/hypothetical protein
	?	NC_014034	2190534 =	161 (0.660)					intergenic (+109/+131)	RCAP_rcc02031/cobB	hypothetical protein/cobyrinic acid A,C‑diamide synthase
Rejected: Position hash score below cutoff.

GGCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC...................................................................................................  <  NC_014034/1473531‑1473412 ....................................................................................................TCGGCCAGCGCCCGCCCCGCCCCCGGCGGGCGCTTCTCGCCCGCCAGGACGGGCGCCGGCCTCTGTCACGCTTGCAGCAGGCGGTCTTTGCAACGCAGTGGCGACCCGGGCGGGCAAAG  >  NC_014034/2190534‑2190632                                                                                                                                                                                                                                                 GCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCC                                                                                                    <  1:3528298/101‑1 (MQ=1)                     GCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCC                                                                                                    >  1:4761257/1‑101 (MQ=1)                     GCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCCCCCGCCCCGCC                                                                                                    >  2:3601267/1‑101 (MQ=1)                       CCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCC                                                                                                  >  1:2340570/1‑101 (MQ=1)                           GCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGC                                                                                              >  1:4547315/1‑101 (MQ=32)                               TTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGCGGGg                                                                                          >  1:4062438/1‑100 (MQ=17)                                   TGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGCCCCCGGCGGGGGCcg                                                                                      >  1:4864958/1‑99 (MQ=17)                                   TGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCCCCCCCCGCGGGGGCcg                                                                                      >  2:3577365/1‑99 (MQ=255)                                                                                                                                                                                                                             GGCGGCGGTTGGGGGTCTAGGCCCCTGCCCTTTTTGACCGAGGCCATCGCCGAGGTCATGCGCGACATTTGCCCCGTGACCGCCGGGGGCCCAAAGGCCCTCGGCCAGCGCCCGCCCCGC...................................................................................................  <  NC_014034/1473531‑1473412 ....................................................................................................TCGGCCAGCGCCCGCCCCGCCCCCGGCGGGCGCTTCTCGCCCGCCAGGACGGGCGCCGGCCTCTGTCACGCTTGCAGCAGGCGGTCTTTGCAACGCAGTGGCGACCCGGGCGGGCAAAG  >  NC_014034/2190534‑2190632 Base quality scores:  ATCG  < 3 ≤  ATCG  < 16 ≤  ATCG  < 29 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG