New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1577306 =221 (0.990)2 (0.010) 2/182 28.4 0.01 coding (123/360 nt) RCAP_rcc01457 DeoR family transcriptional regulator
?NC_014034 = 2211872 167 (0.680)coding (133/624 nt) bluB cob(II)yrinic acid a,c‑diamide reductase
Rejected: Position hash score below cutoff.

AAGGTTCGAACAAATCCTGATGCTCCTGCGCGACGGCGAGTTGCTCCGGGCGCGCGACGTGGCGGCGCGACTCGGGGTGTCGGAGCGCACGATCTGGCGCGACATGGCC....................................................................................................  <  NC_014034/1577414‑1577306
....................................................................................................GACATGGCCCCCTCGGTCGGCAATGCGCGGCCCTGGCGGGTGATCCGGGTGGACAGCCCGGCGCTGCGGGCCGAGGTGCTGGCGAATTTCAACGCCGCGCGCGCGGCGG  <  NC_014034/2211872‑2211773
                                                                                                                                                                                                                 
                                     GAGTTGCTCCGGGCGCGCGACGTGGCGGCGCGACTCGGGGTGTCGGAGCGCACGATCTGGCGCGACATGGCCCCCTCGGTCGGCAATGCGCGGCCCTGGCG                                                                         >  2:4428136/1‑101 (MQ=255)
                                                                        CGGGGTGTCGGAGCGCACGATCTGGCGCGACATGGCCCCCTCGGTCGGCAATGCGCGGCCCTGGCGGGTGATCCGGGTGGACAGCCCGGCGCTGCGGGCCG                                      <  1:4428455/101‑1 (MQ=255)
                                                                                                                                                                                                                 
AAGGTTCGAACAAATCCTGATGCTCCTGCGCGACGGCGAGTTGCTCCGGGCGCGCGACGTGGCGGCGCGACTCGGGGTGTCGGAGCGCACGATCTGGCGCGACATGGCC....................................................................................................  <  NC_014034/1577414‑1577306
....................................................................................................GACATGGCCCCCTCGGTCGGCAATGCGCGGCCCTGGCGGGTGATCCGGGTGGACAGCCCGGCGCTGCGGGCCGAGGTGCTGGCGAATTTCAACGCCGCGCGCGCGGCGG  <  NC_014034/2211872‑2211773

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG