New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	158479 =	NA (NA)	3 (0.010)	3/194	28.2	0.03	coding (53/1176 nt)	tuf1	translation elongation factor Tu
	?	NC_014034	3557414 =	191 (0.780)					coding (380/984 nt)	RCAP_rcc03360	iron siderophore/cobalamin ABC transporter permease
Rejected: Position hash score below cutoff.

TCTTCCGGCGCACCGTCGATCTGGTCATAGGCGCGGAATTCGCCGTAGTACTTCGTGATCGCCGCCGTCAGCGTCGTCTTGCCGTGGTCCACGTGGCCGATCG....................................................................................................  <  NC_014034/158578‑158479 ....................................................................................................TCGGTGCGATCCTGTTTCTGGCCGGGCGCGGCGGCACGCTGGCGCTGATCCTGGCGGGGATCGCGCTTTCGGCGCTGGCCTCGGCGCTGACCTCGCTGGTGCT  >  NC_014034/3557414‑3557516                                                                                                                                                                                                                TCCGGCGCACCGTCGATCTGGTCATAGGCGCGGAATTCGCCGTAGTACTTCGTGATCGCCGCCGTCAGCGTCGTCTTGCCGTGGTCCACGTGGCCGATCGG                                                                                                     >  2:3717082/1‑101 (MQ=255)                          CATAGGCGAGGAATTCGCCGTAGTACTTCGTGATCGCCGCCGTCAGCGTCGTCTTGCCGTGGTCCACGTGGCCGATCGGTGCGATCCTGTTTCTGGCCGGG                                                                               >  2:230304/1‑101 (MQ=255)                                                                      AGCGTCGTCTTGCCGTGGTCCACGTGGCCGATCGGTGCGATCCTGTTTCTGGCCGGGCGCGGCGGCACGCTGGCGCTGATCCTGGCGGGGATCGCGCTTTC                                   <  1:230338/101‑1 (MQ=255)                                                                                                                                                                                                             TCTTCCGGCGCACCGTCGATCTGGTCATAGGCGCGGAATTCGCCGTAGTACTTCGTGATCGCCGCCGTCAGCGTCGTCTTGCCGTGGTCCACGTGGCCGATCG....................................................................................................  <  NC_014034/158578‑158479 ....................................................................................................TCGGTGCGATCCTGTTTCTGGCCGGGCGCGGCGGCACGCTGGCGCTGATCCTGGCGGGGATCGCGCTTTCGGCGCTGGCCTCGGCGCTGACCTCGCTGGTGCT  >  NC_014034/3557414‑3557516 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG