New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 1702591170 (0.770)3 (0.010) 2/180 28.3 0.02 coding (954/1368 nt) radA DNA repair protein RadA
?NC_014034 3177194 = 196 (0.800)coding (202/1269 nt) RCAP_rcc02987 OmpA/MotB domain‑containing protein
Rejected: Position hash score below cutoff.

GGAACACATCCAGCCCGGCAAAGGGAATGCCGCAGCGGCTTTCCAGCACGGCCAGAATGGTCGAGACCCGCCCCGAATCGAGCCCCACCACCGTGCGCCGGGGGCTGGCG.................................................................................................  >  NC_014034/1702482‑1702591
....................................................................................................GGGGCTGGCGCAGGCGCTGTCGCTGGAACAGGCGCAGACCGAGGCGCTGACCGGACGGCTGGAGGCTGCGGGGGCGCGGATCACCGCCTTCGAGGCGCAGGTGGCGG  >  NC_014034/3177194‑3177290
                                                                                                                                                                                                               
                  CAAAGGGAATGCCGCAGCGGCTTTCCAGCACGGCCAGAATGGTCGAGACCCGCCCCGAATCGAGCCCCACCACCGTGCGCCGGGGGCTGGCGCgcgagggg                                                                                          >  1:4025201/1‑93 (MQ=255)
                                                  GCCAGAATGGTCGAGACCCGCCCCGAATCGAGCCCCACCACCGTGCGCCGGGGGCTGGCGCAGGCGCTGTCGCTGGAACAGGCGCAGACCGAGGCGCTGAC                                                          >  1:794148/1‑101 (MQ=255)
                                                            gCGAGCCCCGCCCCGAATCGAGCCCCACCACCGTGCGCCGGGGGCTGGCGCAGGCGCTGTCGCTGGAACAGGCGCAGACCGAGGCGCTGACCGGACGGCTG                                                <  2:794046/100‑1 (MQ=255)
                                                                                                                                                                                                               
GGAACACATCCAGCCCGGCAAAGGGAATGCCGCAGCGGCTTTCCAGCACGGCCAGAATGGTCGAGACCCGCCCCGAATCGAGCCCCACCACCGTGCGCCGGGGGCTGGCG.................................................................................................  >  NC_014034/1702482‑1702591
....................................................................................................GGGGCTGGCGCAGGCGCTGTCGCTGGAACAGGCGCAGACCGAGGCGCTGACCGGACGGCTGGAGGCTGCGGGGGCGCGGATCACCGCCTTCGAGGCGCAGGTGGCGG  >  NC_014034/3177194‑3177290

Base quality scores:  ATCG  < 3 ≤  ATCG  < 14 ≤  ATCG  < 26 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG