New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 1846232 =225 (1.020)2 (0.010) 2/180 28.3 0.01 coding (140/255 nt) RCAP_rcc01713 lipoprotein
?NC_014034 3572157 = 195 (0.800)coding (142/792 nt) phnX phosphonoacetaldehyde hydrolase
Rejected: Position hash score below cutoff.

CTCGCGCACGGGGCGGTGCATCACGCGGAAGGCAAGCTTGAACGACAGCGGGCCGACGCCGAGCGACAGCAGGAAGGCCACCGGCCAGGCGGTCAGCCAGTTGCGCAGCC....................................................................................................  <  NC_014034/1846341‑1846232
....................................................................................................TTGCGCAGCCCCATCGGCTTTCTGGCATCGGCGGCGCTGACGGTGACGCCGAATTCGGCGAAGGCCCGCACAAAGGCCCCCACCGGCGCCAAAGAGCCGAAATCGACCAT  >  NC_014034/3572157‑3572256
                                                                                                                                                                                                                  
                                                           CGAGCGACAGCAGGAAGGCCACCGGCCAGGCGGTCAGCCAGTTGCGCAGCCCCATCGGCTTTCTGGCATCGGCGGCGCTGACGGTGACGCCGAATTCGGCG                                                    >  2:1130917/1‑101 (MQ=255)
                                                                   AGCAGGAAGGCCACCGGCCAGGCGGTCAGCCAGTTGCGCAGCCCCATCGGCTTTCTGGCATCGGCGGCGCTGACGGTGACGCCGAATTCGGCGAAGGCCCG                                            <  1:1131031/101‑1 (MQ=255)
                                                                                                                                                                                                                  
CTCGCGCACGGGGCGGTGCATCACGCGGAAGGCAAGCTTGAACGACAGCGGGCCGACGCCGAGCGACAGCAGGAAGGCCACCGGCCAGGCGGTCAGCCAGTTGCGCAGCC....................................................................................................  <  NC_014034/1846341‑1846232
....................................................................................................TTGCGCAGCCCCATCGGCTTTCTGGCATCGGCGGCGCTGACGGTGACGCCGAATTCGGCGAAGGCCCGCACAAAGGCCCCCACCGGCGCCAAAGAGCCGAAATCGACCAT  >  NC_014034/3572157‑3572256

Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG