New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1855664	277 (1.180)	2 (0.010)	2/192	29.2	0.01	intergenic (‑91/+136)	RCAP_rcc01722/ccpA	BadM/Rrf2 family transcriptional regulator/cytochrome‑c peroxidase
	?	NC_014034	= 1855672	277 (1.130)					intergenic (‑99/+128)	RCAP_rcc01722/ccpA	BadM/Rrf2 family transcriptional regulator/cytochrome‑c peroxidase
Rejected: Position hash score below cutoff.

TCGTCAGTCGCATGCTGGCTCCAGGGGTTGCCGAAAACGGAATAAGGCATGTCACAGATATTGTTTTGACATATGTCAGGATTTCGCGGCGATTGACAGTGCAA....................................................................................................  >  NC_014034/1855561‑1855664 ....................................................................................................GCAAGGACACCGTTGCACTGTCAATCGCCGCGAAATCCTGACATATGTCAAAACAATATCTGTGACATGCCTTATTCCGTTTTCGGCAACCCCTGGAGCCAGCA  <  NC_014034/1855672‑1855573                                                                                                                                                                                                                                                                                  ACATATGTCAGGATTTCGCGGCGATTGACAGTGCAAGGACACCGTTGCACTGTCAATCGCCGCGAAATCCTGACATATGTCAAAACAATATCTGTGACATG                                     >  2:3848336/1‑101 (MQ=255)                                                                            TCAGGATTTCGCGGCGATTGACAGGGCAAGGACACCGTTGCACTGTCAATCGCCGCGAAATCCTGACATATGTCAAAACAATATCTGTGACATGCCTTATT                              <  1:3848621/101‑1 (MQ=255)                                                                                                                                                                                                              TCGTCAGTCGCATGCTGGCTCCAGGGGTTGCCGAAAACGGAATAAGGCATGTCACAGATATTGTTTTGACATATGTCAGGATTTCGCGGCGATTGACAGTGCAA....................................................................................................  >  NC_014034/1855561‑1855664 ....................................................................................................GCAAGGACACCGTTGCACTGTCAATCGCCGCGAAATCCTGACATATGTCAAAACAATATCTGTGACATGCCTTATTCCGTTTTCGGCAACCCCTGGAGCCAGCA  <  NC_014034/1855672‑1855573 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 39 ≤  ATCG