New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 18923 =214 (0.930)2 (0.010) 2/188 28.9 0.01 coding (184/1437 nt) xylB xylulokinase
?NC_014034 3714998 = 233 (0.950)coding (25/420 nt) RCAP_rcc03505 hypothetical protein
Rejected: Position hash score below cutoff.

GACGGCGCCCTTGACCGTTTCCCGCCCGCAGGAGGGCTGGTCAGAACAGGCGCCTGCCGACTGGATCGGCGCGGCGGAAAAGGTGCTGGCGGAACTGGCGGGCT...................................................................................................  <  NC_014034/19026‑18923
..................................................................................................CGGGCTCGGATTTGAAGAGCCATTTCGCCATCAGCCGATCACCTTTTTCCATTCGGTGACGCTGACAGATTCGAAGAGCCCGGCTGCCGCATAGGGATCGCCCGC  >  NC_014034/3714998‑3715096
                                                                                                                                                                                                           
                             AGGAGGGCTGGTCAGAACAGGCGCCTGCCGACTGGATCGGCGCGGCGGAAAAGGTGCTGGCGGAACTGGCGGGCTCGGATTTGAAGAGCCATTTTGCCATC                                                                           >  1:537963/1‑101 (MQ=255)
                             AGGAGGGCTGGTCAGAACAGGCGCCTGCCGACTGGATCGGCGCGGCGGAAAAGGTGCTGGCGGAACTGGCGGGCTCGGATTTGAAGAGCCATTTCGCCATC                                                                           <  2:537884/101‑1 (MQ=255)
                                                                                                                                                                                                           
GACGGCGCCCTTGACCGTTTCCCGCCCGCAGGAGGGCTGGTCAGAACAGGCGCCTGCCGACTGGATCGGCGCGGCGGAAAAGGTGCTGGCGGAACTGGCGGGCT...................................................................................................  <  NC_014034/19026‑18923
..................................................................................................CGGGCTCGGATTTGAAGAGCCATTTCGCCATCAGCCGATCACCTTTTTCCATTCGGTGACGCTGACAGATTCGAAGAGCCCGGCTGCCGCATAGGGATCGCCCGC  >  NC_014034/3714998‑3715096

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG