New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 1906085	168 (0.750)	2 (0.010)	2/184	28.6	0.01	coding (440/516 nt)	cheD	chemoreceptor glutamine deamidase CheD
	?	NC_014034	3400335 =	218 (0.890)					coding (380/630 nt)	RCAP_rcc03201	hypothetical protein
Rejected: Position hash score below cutoff.

CGTGCTCGATTTCCTGCGCCGCGAGGGGATCGAATGCACCGGGCAGAGCCTGGGCGGAACGCAGGCGCGGCGGGTCGAATTCTGGCCCGGAACCGGCCGGGCGCGGCA...................................................................................................  >  NC_014034/1905978‑1906085 ....................................................................................................GCGCGGCATCCATGCGGATGAAGGAAAAACAGGCGCGGATGGCGCCCGCCTCGTCAAAGCGGAAGGTGCGGAACTGGTTCGCCCCGGCATCATCGAGCCGCGCGACG  >  NC_014034/3400335‑3400433                                                                                                                                                                                                                                                GAATGCACCGGGCAGAGCCTGGGCGGAACGCAGGCGCGGCGGGGCGAATTCTGGCCCGGAACCGGCCGGGCGCGGCATCCATGCGGGTGAAGGAAAAACAG                                                                             >  1:2603742/1‑101 (MQ=255)                                         GGGCAGAGCCTGGGCGGAACGCAGGCGCGGCGGGTCGAATTCTGGCCCGGAACCGGCCGGGCGCGGCATCCATGCGGATGAAGGAAAAACAGGCGCGGATG                                                                    <  2:2603561/101‑1 (MQ=255)                                                                                                                                                                                                                 CGTGCTCGATTTCCTGCGCCGCGAGGGGATCGAATGCACCGGGCAGAGCCTGGGCGGAACGCAGGCGCGGCGGGTCGAATTCTGGCCCGGAACCGGCCGGGCGCGGCA...................................................................................................  >  NC_014034/1905978‑1906085 ....................................................................................................GCGCGGCATCCATGCGGATGAAGGAAAAACAGGCGCGGATGGCGCCCGCCTCGTCAAAGCGGAAGGTGCGGAACTGGTTCGCCCCGGCATCATCGAGCCGCGCGACG  >  NC_014034/3400335‑3400433 Base quality scores:  ATCG  < 3 ≤  ATCG  < 8 ≤  ATCG  < 23 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG