New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 194331228 (1.020)3 (0.010) 3/182 27.4 0.01 coding (5509/5982 nt) RCAP_rcc00167 family 2 glycosyl transferase
?NC_014034 2674036 = 195 (0.800)coding (558/675 nt) RCAP_rcc02490 OmpA family protein
Rejected: Position hash score below cutoff.

AAAGCACCTCGGAGATTTCCTCGGCGCCGTCGCGGCAGTAGTTCTGCGCCCAATGCGTCGGGCTGATCTTGTCGGTGTAATAGCGGTAGTTCGCCGCCAGCGGCGTGCC....................................................................................................  >  NC_014034/194223‑194331
....................................................................................................CGGCGTGCCCTCCTATCGCGTCGTGGCTTACGGCCGCGGCGAGGAACAGCCGGTCGCCTCGAACCTCAGCGCCGCGGGCAAGGCGCAAAACCGCCGCGTCGAATTCATC  >  NC_014034/2674036‑2674135
                                                                                                                                                                                                                 
                                                   AATGCGTCGGGCTGATCTTGTCGGTGTAATAGCGGTAGTTCGCCGCCAGCGGCGTGCCCTCCTATCGCGTCGTGGCTTACGGCCGCGGCGAGGAACAGCCG                                                           >  1:3424034/1‑101 (MQ=255)
                                                      GCGTCGGGCTGATCTTGTCGGTGTAATAGCGGTAGTTCGCCGCCAGCGGCGTGCCCTCCTATCGCGTCGTGGCTTACGGCCGCGGCGAGGAACAGCCGGTC                                                        <  2:3423770/101‑1 (MQ=255)
                                                                                                   GCGGCGTCCCCTCCTATCGCGTCGTGGCTTACGGCCGCGGCGAGGAACAGCCGGTCGCCTCGAACCTCAGCGCCGCGGGCAAGGCGCAAAACCGCCGCGTC           <  2:2659980/101‑1 (MQ=255)
                                                                                                                                                                                                                 
AAAGCACCTCGGAGATTTCCTCGGCGCCGTCGCGGCAGTAGTTCTGCGCCCAATGCGTCGGGCTGATCTTGTCGGTGTAATAGCGGTAGTTCGCCGCCAGCGGCGTGCC....................................................................................................  >  NC_014034/194223‑194331
....................................................................................................CGGCGTGCCCTCCTATCGCGTCGTGGCTTACGGCCGCGGCGAGGAACAGCCGGTCGCCTCGAACCTCAGCGCCGCGGGCAAGGCGCAAAACCGCCGCGTCGAATTCATC  >  NC_014034/2674036‑2674135

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG