New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2013344 =236 (1.010)2 (0.010) 2/190 29.0 0.02 coding (258/564 nt) aroK shikimate kinase
?NC_014034 = 3054720 NA (NA)coding (1037/1737 nt) actP3 cation/acetate symporter ActP
Rejected: Position hash score below cutoff.

AGCGTTCGGTTGCCGAGATCTTCGAACGCGATGGCGAGCCGTTCTTTCGCGCCCGCGAATCGGAGGTGATCGAGCGGCTGCTCTCGGGCACGCCCGGGGTGGTC....................................................................................................  <  NC_014034/2013447‑2013344
...................................................................................................TGGTCAGGACATAGACGATGGCGCCAAAGCCGATGATGAAGGTCAGCATGTAGAAATAGCCGATCCAGACCGTCGCCCACATCACCGACTTGCGCGCTTCCTTGG  <  NC_014034/3054720‑3054621
                                                                                                                                                                                                            
                                  CGAGCCGTTCTTTCGCGCCCGCGAATCGGAGGTGATCGAGCGGCTGCTCTCGGGCACGCCCGGGGTGGTCAGGACATAGACGATGGCGCCAAAGCCGATGA                                                                       >  2:2367076/1‑101 (MQ=255)
                                                                   GATCGAGCGGCTGCTCTCGGGCACGCCCGGGGTGGTCAGGACATAGACGATGGCGCCAAAGCCGATGATGAAGGTCAGCATGTAGAAATAGCCGATCCAGA                                      <  1:2367240/101‑1 (MQ=255)
                                                                                                                                                                                                            
AGCGTTCGGTTGCCGAGATCTTCGAACGCGATGGCGAGCCGTTCTTTCGCGCCCGCGAATCGGAGGTGATCGAGCGGCTGCTCTCGGGCACGCCCGGGGTGGTC....................................................................................................  <  NC_014034/2013447‑2013344
...................................................................................................TGGTCAGGACATAGACGATGGCGCCAAAGCCGATGATGAAGGTCAGCATGTAGAAATAGCCGATCCAGACCGTCGCCCACATCACCGACTTGCGCGCTTCCTTGG  <  NC_014034/3054720‑3054621

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG