New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2161239 =	303 (1.260)	2 (0.010)	2/196	29.4	0.01	coding (2830/3858 nt)	RCAP_rcc02005	hypothetical protein
	?	NC_014034	2161254 =	317 (1.290)					coding (2845/3858 nt)	RCAP_rcc02005	hypothetical protein
Rejected: Position hash score below cutoff.

GGTCTTGATCGCCGCAGCGTAACTTTGCCGCTCCTCGGGGGAAATCGTTTTTGGGTGACACTTCATCACCTTGTCGTGCAGGTCGGTGCGCAGTTCCTGGGC....................................................................................................  <  NC_014034/2161340‑2161239 ....................................................................................................GCACCGACCTGCACGACAAGGTGATGAAGTGTCACCCAAAAACGATTTCCCCCGAGGAGCGGCAAAGTTACGCTGCGGCGATCAAGACCATCGAGGAACACC  >  NC_014034/2161254‑2161353                                                                                                                                                                                                                                          CTCCTCGGGGGAAATCGTTTTTGGGTGACACTTCATCACCTTGTCGTGCAGGTCGGTGCGCAGTTCCTGGGCACCGACCTGCACGACAAGGTGATGAAGTG                                                                         >  1:3132608/1‑101 (MQ=255)                                    CGGGGGAAATCGTTTTTGGGTGACACTTCATCACCTTGTCGTGCAGGTCGGTGCGCAGTTCCTGGGCACCGACCTGCACGACAAGGTGATGAAGTGTCACC                                                                    <  2:3132370/101‑1 (MQ=255)                                                                                                                                                                                                            GGTCTTGATCGCCGCAGCGTAACTTTGCCGCTCCTCGGGGGAAATCGTTTTTGGGTGACACTTCATCACCTTGTCGTGCAGGTCGGTGCGCAGTTCCTGGGC....................................................................................................  <  NC_014034/2161340‑2161239 ....................................................................................................GCACCGACCTGCACGACAAGGTGATGAAGTGTCACCCAAAAACGATTTCCCCCGAGGAGCGGCAAAGTTACGCTGCGGCGATCAAGACCATCGAGGAACACC  >  NC_014034/2161254‑2161353 Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 39 ≤  ATCG