New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	221956 =	300 (1.320)	51 (0.220)	19/186	17.4	0.15	coding (701/2748 nt)	RCAP_rcc00185	hypothetical protein
	?	NC_014034	= 222119	277 (1.130)					coding (538/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.

CCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC.....................................................  <  NC_014034/222046‑221956 ..................................................................................................CCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACC  <  NC_014034/222119‑222074                                                                                            |||||||                                               CCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCG                                             <  1:4429174/101‑1 (MQ=0)             cgGATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACG                                 >  2:3020936/3‑101 (MQ=9)             cgGATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACG                                 >  1:1188791/3‑101 (MQ=9)              gGATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGG                                >  1:4205040/2‑101 (MQ=2)              gGATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGG                                >  1:1379237/2‑101 (MQ=2)              gGATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGG                                >  1:2042265/2‑101 (MQ=2)                acccgACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGAT                              <  1:3769847/96‑1 (MQ=9)                ATCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGAT                              >  1:4892025/1‑101 (MQ=0)                 TCCGACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATC                             <  1:4792420/101‑1 (MQ=2)                 TCCCACGGACCCGACCGACCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATC                             <  1:1053552/101‑1 (MQ=0)                  ccgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCC                            <  2:674740/98‑1 (MQ=2)                  ccgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCC                            >  1:3316895/4‑101 (MQ=0)                   cgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCG                           >  1:1141956/3‑101 (MQ=0)                   cgACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCG                           <  2:3241896/99‑1 (MQ=0)                    gACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGc                          >  2:1138113/2‑100 (MQ=0)                     ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGAC                         >  2:1811554/1‑101 (MQ=0)                     ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATACCACGGATCCGAC                         >  2:3616070/1‑101 (MQ=0)                     ACGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCCACCGATCCCACGGATCCGAC                         >  2:1888495/1‑101 (MQ=0)                      CGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACC                        <  1:3000167/101‑1 (MQ=0)                      CGGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACC                        <  1:2690273/101‑1 (MQ=0)                       GGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCG                       >  2:1306952/1‑101 (MQ=0)                       GGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCG                       >  1:1077389/1‑101 (MQ=0)                       GGACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCG                       >  2:2742895/1‑101 (MQ=0)                        GACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGA                      >  2:1240232/1‑101 (MQ=0)                        GACCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGA                      >  2:3311430/1‑101 (MQ=0)                          CCCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACAGATCCGACCGATCCCACGGATCCGACCGATC                    <  1:4481513/101‑1 (MQ=0)                           CCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCC                   >  1:2867614/1‑101 (MQ=0)                           CCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCC                   <  2:2817248/101‑1 (MQ=0)                           CCGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGACCC                   >  1:3527732/1‑101 (MQ=0)                            CGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCC                  >  1:4878154/1‑101 (MQ=2)                            CGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCC                  <  1:626536/101‑1 (MQ=2)                            CGACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCC                  <  1:3179072/101‑1 (MQ=0)                             GACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCA                 >  1:2092250/1‑101 (MQ=2)                             GACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCA                 >  1:1381733/1‑101 (MQ=2)                              ACCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGACCCGACCGATCCCAC                >  2:2718996/1‑101 (MQ=18)                               CCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG               <  1:3311692/101‑1 (MQ=2)                               CCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG               <  2:4221256/101‑1 (MQ=2)                               CCGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACG               <  2:635033/101‑1 (MQ=0)                                CGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG              >  2:982553/1‑101 (MQ=2)                                CGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG              <  1:671083/101‑1 (MQ=2)                                CGATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG              >  1:1680042/1‑101 (MQ=0)                                 GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA             >  1:4994590/1‑101 (MQ=0)                                 GATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA             >  1:1795174/1‑101 (MQ=0)                                  ATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTCCGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt            >  2:4084595/1‑100 (MQ=2)                                  ATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt            >  1:2374590/1‑100 (MQ=9)                                  ATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAC            >  2:3497936/1‑101 (MQ=0)                                  ATCCCACGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCACACGGAt            >  2:2040685/1‑100 (MQ=9)                                        CGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACc      <  1:3767911/101‑2 (MQ=12)                                        CGGATCCGACCGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACc      >  1:1027728/1‑100 (MQ=2)                                         GGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCGACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGG     >  2:691844/1‑101 (MQ=12)                                            cCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACC  <  1:307033/100‑1 (MQ=14)                                                                                            |||||||                                               CCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC.....................................................  <  NC_014034/222046‑221956 ..................................................................................................CCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACC  <  NC_014034/222119‑222074 Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG