New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 221956 =313 (1.300)9 (0.040) 4/196 27.4 0.03 coding (701/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222126 241 (0.980)coding (531/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

CCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC....................................................................................................  <  NC_014034/222057‑221956
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCC  <  NC_014034/222126‑222027
                                                                                                                                                                                                          
                                                    GATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGc                                                   >  2:1299967/1‑100 (MQ=0)
                                                     ATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGACCCCACGGATCCGCCGGAC                                                  >  1:3444720/1‑101 (MQ=0)
                                                      cCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACC                                                 <  1:307033/100‑1 (MQ=14)
                                                       CCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCC                                                <  2:3207787/101‑1 (MQ=0)
                                                        cgcaCGATCCCACGGGCCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc                                               <  1:1480797/97‑2 (MQ=0)
                                                        CGACCGATCCCACGGCCCCGACCGATCCCACGGCCCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc                                               <  1:4298439/101‑2 (MQ=0)
                                                         gccccATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCca                                              <  2:4914652/96‑3 (MQ=0)
                                                            CGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCCACGGACCCGACCa                                           >  2:2316827/1‑100 (MQ=0)
                                                             GATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGACCCCACCGc                                          >  1:2075276/1‑100 (MQ=14)
                                                                                                                                                                                                          
CCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC....................................................................................................  <  NC_014034/222057‑221956
....................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCC  <  NC_014034/222126‑222027

Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 23 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG