New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	221974 =	805 (3.910)	26 (0.130)	3/168	26.3	0.05	coding (683/2748 nt)	RCAP_rcc00185	hypothetical protein
	?	NC_014034	= 222128	208 (0.850)					coding (529/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.

TCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCC........................................................................  <  NC_014034/222066‑221974 .............................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCC  <  NC_014034/222128‑222073                                                                                              ||||||||||||||||                                                         TCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCGACGGAtc                                                                  >  2:4502932/1‑99 (MQ=9)     ACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGGCCCGAC                                                              >  1:3676861/1‑101 (MQ=0)       GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGCCCG                                                            >  2:4102895/1‑101 (MQ=0)       GGACCCGACCCATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCG                                                            <  2:576216/101‑1 (MQ=0)                     CCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGACCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCG                                              <  1:92785/101‑1 (MQ=0)                      CACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACGGATCCCACGGACCCGA                                             >  2:2345867/1‑101 (MQ=0)                        ctgacCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACC                                           <  1:341954/96‑1 (MQ=1)                        cggccCCGACCGATCCCACGGACCCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACC                                           <  1:2781043/96‑1 (MQ=0)                         GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCCCGGACCCGACCG                                          >  2:4877601/1‑101 (MQ=0)                               GACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGCCCGAACCCA                                    >  2:537950/1‑101 (MQ=2)                                      CCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGCTCC                             >  2:4669518/1‑101 (MQ=0)                                        CACGGAGCCGACCGATCCCACGGACCCGACCGATCCCCCGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCca                           <  1:532930/101‑3 (MQ=0)                                         ACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGCCGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCAC                          >  1:1913292/1‑101 (MQ=0)                                         ACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCCCGGATCCCAC                          >  2:4326875/1‑101 (MQ=0)                                          CGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCCACC                         >  1:4408746/1‑101 (MQ=0)                                           GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGACCCCACGGATCCCACCG                        >  1:1213004/1‑101 (MQ=0)                                            gcCCCGACCGATCCCACGGCCCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGA                       <  2:702032/99‑1 (MQ=0)                                                CGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATtcg                   <  1:3735981/101‑4 (MQ=0)                                                  ACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGAC                 <  1:4757247/101‑1 (MQ=0)                                                  ACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGAC                 <  1:4734485/101‑1 (MQ=0)                                                     GATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGA              >  2:5005106/1‑101 (MQ=0)                                                      ATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGAC             >  2:3708140/1‑101 (MQ=11)                                                      ATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGAC             >  1:546986/1‑101 (MQ=11)                                                      ATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGAC             >  1:3530553/1‑101 (MQ=11)                                                       aCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACC            <  1:2414122/100‑1 (MQ=17)                                                       TCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACC            >  1:2765296/1‑101 (MQ=14)                                                        CCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCC           <  2:4978312/101‑1 (MQ=17)                                                         CCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCG          <  1:4503252/101‑1 (MQ=18)                                                           ACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCCACCGATCCGACGGACCCGAC        <  1:608207/101‑1 (MQ=18)                                                                 CCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCC  <  2:3207787/101‑1 (MQ=0)                                                                                              ||||||||||||||||                                                         TCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCC........................................................................  <  NC_014034/222066‑221974 .............................................................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCC  <  NC_014034/222128‑222073 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG