BRESEQ :: Evidence

New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 222068	747 (3.080)	20 (0.080)	2/198	29.6	0.03	coding (589/2748 nt)	RCAP_rcc00185	hypothetical protein
*	?	NC_014034	= 222082	577 (2.360)	20 (0.080)	2/198	29.6	0.03	coding (575/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.


TCCGTGGGATCGGTCGGGTCCGTGGGATCGGTCGGATCCGTGGGATCGGTCGGGTCCGTGGGATCGGTCGGATCCGTGGGATCGGTCGGGTCCGTAGGATC....................................................................................................  >  NC_014034/221968‑222068


....................................................................................................CCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC  <  NC_014034/222082‑221983


                                                                                            cgcccGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC          <  1:789262/96‑1 (MQ=0)


                                                                                            cgaccGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCC          <  2:5016845/96‑1 (MQ=0)


                                                                                             gaccGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA         >  2:2054555/5‑101 (MQ=0)


                                                                                             gaccGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCA         <  1:3479273/97‑1 (MQ=0)


                                                                                              accGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC        <  2:1307959/98‑1 (MQ=0)


                                                                                              accGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC        <  2:2092102/98‑1 (MQ=0)


                                                                                              accGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCAC        <  2:4311654/98‑1 (MQ=0)


                                                                                                cGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG      >  2:4697150/2‑101 (MQ=0)


                                                                                                cGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG      >  1:3925939/2‑101 (MQ=0)


                                                                                                cGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG      <  1:1160963/100‑1 (MQ=0)


                                                                                                cGATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATACCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGG      >  2:1030616/2‑101 (MQ=0)


                                                                                                 GATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA     >  1:3042694/1‑101 (MQ=0)


                                                                                                 GATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA     >  2:470031/1‑101 (MQ=0)


                                                                                                 GATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGA     >  1:3192344/1‑101 (MQ=0)


                                                                                                  ATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt    <  1:276401/101‑2 (MQ=0)


                                                                                                  ATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt    <  2:2630990/101‑2 (MQ=0)


                                                                                                  ATCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAt    >  2:2950241/1‑100 (MQ=0)


                                                                                                   TCCGACGGACCCGCCCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAtc   <  2:3774700/101‑3 (MQ=0)


                                                                                                   TCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAtc   >  1:1518134/1‑99 (MQ=0)


                                                                                                   TCCGACGGACCCGACCGATCCTACGGACCCGACCGATCCTACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGAtc   <  2:4670301/101‑3 (MQ=0)


TCCGTGGGATCGGTCGGGTCCGTGGGATCGGTCGGATCCGTGGGATCGGTCGGGTCCGTGGGATCGGTCGGATCCGTGGGATCGGTCGGGTCCGTAGGATC....................................................................................................  >  NC_014034/221968‑222068


....................................................................................................CCGACGGACCCGACCGATCCTACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCC  <  NC_014034/222082‑221983

Base quality scores:


ATCG

< 3 ≤


ATCG

< 20 ≤


ATCG

< 26 ≤


ATCG

< 33 ≤


ATCG

< 40 ≤


ATCG