New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 222079 =375 (1.960)11 (0.060) 5/156 23.4 0.04 coding (578/2748 nt) RCAP_rcc00185 hypothetical protein
?NC_014034 = 222128 187 (0.760)coding (529/2748 nt) RCAP_rcc00185 hypothetical protein
Rejected: Position hash score below cutoff.

AGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC....................................................................................  <  NC_014034/222131‑222079
...........................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGA  <  NC_014034/222128‑222067
                                                     ||||||||||||||||||||||                                                              
gaCCCCGCGGACCCGACCGATCCCCCGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGA                                      <  1:1007819/99‑1 (MQ=255)
 aCCCCACGGTCCCGACCGATCCCCCGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGAc                                     <  2:636500/100‑2 (MQ=0)
                           GATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGc           >  2:1299967/1‑100 (MQ=0)
                            ATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGACCCCACGGATCCGCCGGAC          >  1:3444720/1‑101 (MQ=0)
                             cCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACC         <  1:307033/100‑1 (MQ=14)
                              CCGCCCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCC        <  2:3207787/101‑1 (MQ=0)
                               cgcaCGATCCCACGGGCCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc       <  1:1480797/97‑2 (MQ=0)
                               CGACCGATCCCACGGCCCCGACCGATCCCACGGCCCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCc       <  1:4298439/101‑2 (MQ=0)
                                gccccATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCca      <  2:4914652/96‑3 (MQ=0)
                                   CGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCGACGGACCCCACGGACCCGACCa   >  2:2316827/1‑100 (MQ=0)
                                    GATCCCACGGATCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGACCCGACGGACCCCACCGc  >  1:2075276/1‑100 (MQ=14)
                                                     ||||||||||||||||||||||                                                              
AGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC....................................................................................  <  NC_014034/222131‑222079
...........................................................................CCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCGA  <  NC_014034/222128‑222067

Base quality scores:  ATCG  < 3 ≤  ATCG  < 14 ≤  ATCG  < 23 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG