New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	222085 =	306 (1.730)	35 (0.200)	8/144	20.0	0.13	coding (572/2748 nt)	RCAP_rcc00185	hypothetical protein
	?	NC_014034	= 222110	176 (0.720)					coding (547/2748 nt)	RCAP_rcc00185	hypothetical protein
Rejected: Position hash score below cutoff.

CCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGA.......................................................................  <  NC_014034/222133‑222085 .............................................................................CCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222110‑222068                                                  ||||||||||||||||||||||||||||                                            ccgatCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCCCG                     >  1:4862407/6‑101 (MQ=0)   gatCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCAATCCCACGGA                   >  1:3687281/4‑101 (MQ=0)    atCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGACGGACCCCCCGGACCCGACCGATCCCACGGAC                  >  1:2029629/3‑101 (MQ=2)     tCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGATCCGACCGATCCCCCGGACC                 >  2:955080/2‑101 (MQ=21)     tCCCACGGACCCGACCGATCCCACGGACCCGACGGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACC                 <  1:2451204/100‑1 (MQ=9)     tCCCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACC                 <  2:478162/100‑1 (MQ=17)       CCACGGCCCCCACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCG               <  2:719818/101‑1 (MQ=255)       CCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCG               >  1:773280/1‑101 (MQ=0)       CCACGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCG               >  2:141250/1‑101 (MQ=2)        CACGGACCCGACCGATCCCACGAATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGA              <  2:2514352/101‑1 (MQ=12)         cgGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGAC             <  1:3456392/99‑1 (MQ=9)         agtGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGAC             <  1:2794953/98‑1 (MQ=12)         ACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGACCCGAC             >  1:667557/1‑101 (MQ=17)         ACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGAC             >  2:2346175/1‑101 (MQ=17)         ACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCCATCCCACGGACCCGAC             >  2:4531204/1‑101 (MQ=12)          CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACc            <  2:3300550/101‑2 (MQ=11)          CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACc            <  2:530881/101‑2 (MQ=11)          CGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACc            <  2:3429960/101‑2 (MQ=11)          CGGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACc            <  2:3493360/101‑2 (MQ=9)          CGGACCCGACCGACCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACc            <  2:4768829/101‑2 (MQ=2)           gcACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           <  2:1007474/99‑3 (MQ=0)           GGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           >  2:673328/1‑99 (MQ=11)           GGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           >  2:5005867/1‑99 (MQ=11)           GGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           >  1:2560862/1‑99 (MQ=11)           GGACCCGACCGATCCCACGGACCCGACTGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           <  2:1328397/101‑3 (MQ=9)           GGACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACcg           <  1:2522881/101‑3 (MQ=12)            gcCCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGA          <  1:357538/99‑1 (MQ=19)            GACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGA          >  1:1458039/1‑101 (MQ=0)            GACCCGACCGATCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGA          <  2:521374/101‑1 (MQ=12)             gCCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGAt         <  2:1836190/100‑2 (MQ=0)              CCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGAtc        <  2:3384951/101‑3 (MQ=0)               CCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACGGATCC       >  2:4188742/1‑101 (MQ=12)               CCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC       >  2:3358291/1‑101 (MQ=0)               CCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGATCC       <  1:3437523/101‑1 (MQ=0)                    CGATCCCACGGATCCGACCGATCCCACGGATCCGACCGATCCCACGGATCCGACGGACCCCACGGACCCGACCGATCCCACGGACCCGACCGACCCCACgg  >  2:4428855/1‑99 (MQ=0)                                                  ||||||||||||||||||||||||||||                                            CCAGCCCCACGGACCCGACCGATCCCACGGATCCGACCGATCCCACGGA.......................................................................  <  NC_014034/222133‑222085 .............................................................................CCCACGGATCCGACCGATCCCACGGACCCGACGGACCCGACCG  <  NC_014034/222110‑222068 Base quality scores:  ATCG  < 3 ≤  ATCG  < 15 ≤  ATCG  < 22 ≤  ATCG  < 31 ≤  ATCG  < 40 ≤  ATCG