New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2286605NA (NA)2 (0.010) 2/184 28.6 0.02 coding (694/1737 nt) actP2 cation/acetate symporter ActP
?NC_014034 3008570 = 199 (0.810)coding (159/228 nt) RCAP_rcc02817 hypothetical protein
Rejected: Position hash score below cutoff.

CCTCGGGGGTCTTGCCCGCCGCCAGCGCCAGATCGGTCTTCACCTTGACCGAGTCCGCAAACAGGCTTTCCAGGCTGAAGCCGTAATGCACCATCACCATCAGCGCCA....................................................................................................  >  NC_014034/2286506‑2286605
....................................................................................................CAGCGCCAGCCGCTCGCCGTTGATGTTGTGCAGCGCATACATGTGGTCGATATGGCCCACCCGGTCGCGGATTTCGGCCGGGATTTCGGTCACCGGGACCGGCCGGAC  >  NC_014034/3008570‑3008677
                                                                                                                                                                                                                
                                            cTGACCGAGTCCGCAAACAGGCTTTCCAGGCTGAAGCCGTAATGCACCATCACCATCAGCGCCAGCCGCTCGCCGTTGATGTTGTGCAGCGCATACATGTG                                                                 <  1:4555943/100‑1 (MQ=255)
                                              GACCGAGTCCGCAAACAGGCTTTCCAGGCTGAAGCCGTAATGCACCATCACCATCAGCGCCAGCCGCTCGCCGTTGATGTTGTGCAGCGCATACATGTGag                                                               >  2:4555623/1‑99 (MQ=255)
                                                                                                                                                                                                                
CCTCGGGGGTCTTGCCCGCCGCCAGCGCCAGATCGGTCTTCACCTTGACCGAGTCCGCAAACAGGCTTTCCAGGCTGAAGCCGTAATGCACCATCACCATCAGCGCCA....................................................................................................  >  NC_014034/2286506‑2286605
....................................................................................................CAGCGCCAGCCGCTCGCCGTTGATGTTGTGCAGCGCATACATGTGGTCGATATGGCCCACCCGGTCGCGGATTTCGGCCGGGATTTCGGTCACCGGGACCGGCCGGAC  >  NC_014034/3008570‑3008677

Base quality scores:  ATCG  < 3 ≤  ATCG  < 17 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG