New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2290009 =	246 (1.100)	2 (0.010)	2/182	28.4	0.01	intergenic (‑201/+100)	acsA1/phaG	acetate‑‑CoA ligase/monovalent cation/proton antiporter subunit G
	?	NC_014034	= 3173674	92 (0.380)					coding (28/507 nt)	RCAP_rcc02983	extensin family protein
Rejected: Position hash score below cutoff.

AGGACTAGGGTCCTGTCCCCCCCGGCGCCGGTCTGACGGAAGGGTCTGCAACCTGGGCGTGTTTTTCGGGCAGGCCCGGCGGCGGCCGGGGCGGGCCTGCGATCGGCG..................................................................................................  <  NC_014034/2290116‑2290009 ...................................................................................................CGATCGGCGGCAGCTCCTGCCCGATCAGGCCGGGCACGCCGCAGACCGACCCGCGCAGGCCGGGCTCGGCCCTGCGGGCCGGAGGGGCTTCGGGCGCGGGCGCTTCC  <  NC_014034/3173674‑3173577                                                                                                                                                                                                                                             GGTCTGACGGAAGGGTCTGCAACCTGGGCGTGTTTTTCGGGCAGGCCCGGCGGCGGCCGGGGCGGGCCTGCGATCGGCGGCAGCTCCTGCCCGATCAGGCC                                                                              >  1:4382844/1‑101 (MQ=255)                               GTCTGACGGAAGGGTCTGCAACCTGGGCGTGTTTTTCGGGCAGGCCCGGCGGCGGCCGGGGCGGGCCTGCGATCGGCGGCAGCTCCTGCCCGATCAGGCCG                                                                             <  2:4382527/101‑1 (MQ=255)                                                                                                                                                                                                                AGGACTAGGGTCCTGTCCCCCCCGGCGCCGGTCTGACGGAAGGGTCTGCAACCTGGGCGTGTTTTTCGGGCAGGCCCGGCGGCGGCCGGGGCGGGCCTGCGATCGGCG..................................................................................................  <  NC_014034/2290116‑2290009 ...................................................................................................CGATCGGCGGCAGCTCCTGCCCGATCAGGCCGGGCACGCCGCAGACCGACCCGCGCAGGCCGGGCTCGGCCCTGCGGGCCGGAGGGGCTTCGGGCGCGGGCGCTTCC  <  NC_014034/3173674‑3173577 Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 31 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG