New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2493322217 (0.960)2 (0.010) 2/184 28.6 0.01 coding (94/480 nt) yqgF holliday junction resolvase YqgF
?NC_014034 2981132 = 242 (0.990)coding (1745/1896 nt) kefC1 glutathione‑regulated potassium‑efflux system protein KefC
Rejected: Position hash score below cutoff.

ATCGGAGCCGCGCCATGATCTGCCCCGGGATGGACGACTTTGCCGCGGCGCTGCCGCGGGTGGGGGCGCTGGCCGGGCTCGATCTGGGCACGAAGACGATCGGGGTCG....................................................................................................  >  NC_014034/2493215‑2493322
....................................................................................................CGGGGTCGAGGCCGAGAAGAACACCGAATATGTGGAGCGGGTGAAGGCGCTGAACACCGAGTTCGAGGCGCAGATGCTGGCGCATTTCACCGAGCGGCGGCGGCAGTC  >  NC_014034/2981132‑2981231
                                                                                                                                                                                                                
                                          CCGCGGCGCTGCCGCGGGTGGGGGCGCTGGCCGGGCTCGATCTGGGCACGAAGACGATCGGGGTCGAGGCCGAGAAGAACACCGAATATGTGGAGCGGGTG                                                                   >  1:3624467/1‑101 (MQ=255)
                                                           ggGGGGGCGCGGGCCGGGCTCGATCGGGGCACGAAGACGATCGGGGTCGAGGCCGAGAAGAACACCGAATATGTGGAGCGGGTGAAGGCGCTGAACACCGA                                                  <  2:3624196/99‑1 (MQ=255)
                                                                                                                                                                                                                
ATCGGAGCCGCGCCATGATCTGCCCCGGGATGGACGACTTTGCCGCGGCGCTGCCGCGGGTGGGGGCGCTGGCCGGGCTCGATCTGGGCACGAAGACGATCGGGGTCG....................................................................................................  >  NC_014034/2493215‑2493322
....................................................................................................CGGGGTCGAGGCCGAGAAGAACACCGAATATGTGGAGCGGGTGAAGGCGCTGAACACCGAGTTCGAGGCGCAGATGCTGGCGCATTTCACCGAGCGGCGGCGGCAGTC  >  NC_014034/2981132‑2981231

Base quality scores:  ATCG  < 3 ≤  ATCG  < 9 ≤  ATCG  < 17 ≤  ATCG  < 33 ≤  ATCG  < 37 ≤  ATCG