New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2501637 =	231 (1.060)	2 (0.010)	2/178	28.2	0.01	coding (480/1206 nt)	RCAP_rcc02327	HK97 family phage portal protein
	?	NC_014034	3537637 =	217 (0.890)					coding (557/1383 nt)	RCAP_rcc03345	XRE family transcriptional regulator
Rejected: Position hash score below cutoff.

CCGTTCGCAAAGAGCTTGGCGATATGTTCTTCAAAGGCGAGGGCAAGACCGATGGCTTCGCGGCCAAGCGTGATCGGCGAGGCACCTCCGAAGGCGCTCACATGCAGAATG....................................................................................................  <  NC_014034/2501747‑2501637 ....................................................................................................CATGCAGAATGCGGATGCCGTGCCGCGTGGCCAGACGCTCGGCCAGGGGCTGCGCCATCCGCCCGGCGGGCAGATCCGCCCCCACCGCCTCGGCCGCGGTGTCAAGATCGG  >  NC_014034/3537637‑3537736                                                                                                                                                                                                                                                       AGGCGAGGGCAAGACCGATGGCTTCGCGGCCAAGCGTGATCGGCGAGGCACCTCCGAAGGCGCTCACATGCAGAATGCGGATGCCGTGCCGCGTGGCCAGA                                                                              >  1:571181/1‑101 (MQ=255)                                   AGGCGAGGGCAAGACCGATGGCTTCGCGGCCAAGCGTGATCGGCGAGGCACCTCCGAAGGCGCTCACATGCAGAATGCGGATGCCGTGCCGCGTGGCCAGA                                                                              <  2:571102/101‑1 (MQ=255)                                                                                                                                                                                                                     CCGTTCGCAAAGAGCTTGGCGATATGTTCTTCAAAGGCGAGGGCAAGACCGATGGCTTCGCGGCCAAGCGTGATCGGCGAGGCACCTCCGAAGGCGCTCACATGCAGAATG....................................................................................................  <  NC_014034/2501747‑2501637 ....................................................................................................CATGCAGAATGCGGATGCCGTGCCGCGTGGCCAGACGCTCGGCCAGGGGCTGCGCCATCCGCCCGGCGGGCAGATCCGCCCCCACCGCCTCGGCCGCGGTGTCAAGATCGG  >  NC_014034/3537637‑3537736 Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG