New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 252150 =190 (0.860)2 (0.010) 2/180 28.3 0.01 coding (1140/1485 nt) argJ arginine biosynthesis bifunctional protein ArgJ
?NC_014034 1106371 = 210 (0.860)coding (400/1107 nt) RCAP_rcc01028 iron siderophore/cobalamin ABC transporter periplasmic iron siderophore/cobalamin‑binding protein
Rejected: Position hash score below cutoff.

AGGATTTCGAAGCGGCGCTGCGCGGGGTGATGCTGGATCTGGCGCAGCAGGTGGTCCGAGACGGCGAGGGCGCGACGAAATTCGTGGAAATCCGGGTCAGCGGCGCGGCG....................................................................................................  <  NC_014034/252259‑252150
....................................................................................................CGGCGCGGCGGGGGTGAAGCAGATCGAGGATGCGGGCATCACCCTTGTCGCCCTTGATTACAACGCGCAGACGCTGGAACGGCACCTGCTCTCGACCCGCATCCTCGGGG  >  NC_014034/1106371‑1106470
                                                                                                                                                                                                                  
                                                                CGAGGGCGCGACGAAATTCGTGGAAATCCGGGTCAGCGGCGCGGCGGGGGTGAAGCAGATCGAGGATGCGGGCATCACCCTTGTCGCCCTTGATTACAACG                                               >  2:535416/1‑101 (MQ=255)
                                                                     GCGCGACGAAATTCGTGGAAATCCGGGTCAGCGGCGCGGCGGGGGTGAAGCAGATCGAGGATGCGGGCATCACCCTTGTCGCCCTTGATTACAACGCGCAG                                          <  1:535495/101‑1 (MQ=255)
                                                                                                                                                                                                                  
AGGATTTCGAAGCGGCGCTGCGCGGGGTGATGCTGGATCTGGCGCAGCAGGTGGTCCGAGACGGCGAGGGCGCGACGAAATTCGTGGAAATCCGGGTCAGCGGCGCGGCG....................................................................................................  <  NC_014034/252259‑252150
....................................................................................................CGGCGCGGCGGGGGTGAAGCAGATCGAGGATGCGGGCATCACCCTTGTCGCCCTTGATTACAACGCGCAGACGCTGGAACGGCACCTGCTCTCGACCCGCATCCTCGGGG  >  NC_014034/1106371‑1106470

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG