New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2652967283 (1.180)2 (0.010) 2/196 29.4 0.01 coding (2241/2562 nt) RCAP_rcc02473 TonB‑dependent receptor plug domain‑containing protein
?NC_014034 = 2652984 283 (1.160)coding (2224/2562 nt) RCAP_rcc02473 TonB‑dependent receptor plug domain‑containing protein
Rejected: Position hash score below cutoff.

TAGGTCGGGTTGGTGTGGGTTTCATCGACATCGGTGTCGCGCACCCCGTCATAGGCGAAGTTGATGTCGGCGCCGATGCCAAGCCCGTATTGCCCGTCCTTC....................................................................................................  >  NC_014034/2652866‑2652967
....................................................................................................TCGAGCTGCAGACCAGCTGGAAGGACGGGCAATACGGGCTTGGCATCGGCGCCGACATCAACTTCGCCTATGACGGGGTGCGCGACACCGATGTCGATGAAA  <  NC_014034/2652984‑2652885
                                                                                                                                                                                                          
                                                                         tGATGCCAAGCCCGTATTGCCCGTCCTTCGAGCTGCAGACCAGCTGGAAGGACGGGCAATACGGGCTTGGCATCGGCGCCGACATCAACTTCGCCTATGAC                              <  1:3727142/100‑1 (MQ=255)
                                                                          GATGCCAAGCCCGTATTGCCCGTCCTTCGAGCTGCAGACCAGCTGGAAGGACGGGCAATACGGGCTTGGCATCGGCGCCGACATCAACTTCGCCTATGACa                             >  2:3726864/1‑100 (MQ=255)
                                                                                                                                                                                                          
TAGGTCGGGTTGGTGTGGGTTTCATCGACATCGGTGTCGCGCACCCCGTCATAGGCGAAGTTGATGTCGGCGCCGATGCCAAGCCCGTATTGCCCGTCCTTC....................................................................................................  >  NC_014034/2652866‑2652967
....................................................................................................TCGAGCTGCAGACCAGCTGGAAGGACGGGCAATACGGGCTTGGCATCGGCGCCGACATCAACTTCGCCTATGACGGGGTGCGCGACACCGATGTCGATGAAA  <  NC_014034/2652984‑2652885

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 31 ≤  ATCG  < 34 ≤  ATCG  < 41 ≤  ATCG