New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 2657997209 (0.930)2 (0.010) 2/184 28.6 0.01 coding (602/1758 nt) RCAP_rcc02475 hypothetical protein
?NC_014034 = 2967616 202 (0.820)coding (352/1308 nt) RCAP_rcc02781 FAD dependent oxidoreductase
Rejected: Position hash score below cutoff.

CGGGCGGGGCCGGTCTGGGCCGGATCGGCGCCACCGGCAGATGCGGCGGCCAGGTGTGGCAGGACTGGCGTCGGCCGAAGCGGGAAAACACCGTGTCCGAGGCCAGGG....................................................................................................  >  NC_014034/2657890‑2657997
....................................................................................................GGCCAGGGCATAAGTCAGGGCCTTGGCCTCCTCGGCCATGTCCCACAGCCTGCGCGTCCTTTCCCGGCCCACCAGCTTTTCCAGCGTGCCGACATCCAGCCGCTGCCC  <  NC_014034/2967616‑2967517
                                                                                                                                                                                                                
                             GCCACCGGCAGATGCGGCGGCCAGGTGTGGCAGGACTGGCGTCGGCCGAAGCGGGAAAACACCGTGTCCGAGGCCAGGGCATAAGTCAGGGCCTTGGCCTC                                                                                >  1:2808940/1‑101 (MQ=255)
                                      AGATGCGGCGGCCAGGTGTGGCAGGACTGGCGTCGGCCGAAGCGGGAAAACACCGTGTCCGAGGCCAGGGCATAAGTCAGGGCCTTGGCCTCCTCGGCCAT                                                                       <  2:2808727/101‑1 (MQ=255)
                                                                                                                                                                                                                
CGGGCGGGGCCGGTCTGGGCCGGATCGGCGCCACCGGCAGATGCGGCGGCCAGGTGTGGCAGGACTGGCGTCGGCCGAAGCGGGAAAACACCGTGTCCGAGGCCAGGG....................................................................................................  >  NC_014034/2657890‑2657997
....................................................................................................GGCCAGGGCATAAGTCAGGGCCTTGGCCTCCTCGGCCATGTCCCACAGCCTGCGCGTCCTTTCCCGGCCCACCAGCTTTTCCAGCGTGCCGACATCCAGCCGCTGCCC  <  NC_014034/2967616‑2967517

Base quality scores:  ATCG  < 3 ≤  ATCG  < 20 ≤  ATCG  < 25 ≤  ATCG  < 33 ≤  ATCG  < 41 ≤  ATCG