New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	2741261 =	191 (0.860)	2 (0.010)	2/182	28.4	0.01	coding (1025/2634 nt)	RCAP_rcc02545	sensor histidine kinase/response regulator receiver protein
	?	NC_014034	= 2946287	197 (0.800)					coding (287/1107 nt)	RCAP_rcc02756	hypothetical protein
Rejected: Position hash score below cutoff.

ATCTCGTCGGCGCGGTTGGCACCGGGCACGGTGGCGTCGCGTTCGCCCGCGGCCAGCCGCACCATCGCCGCCGTCACCCCGCGCAGATTGCGCGAGAGCGGCCGGATCA....................................................................................................  <  NC_014034/2741369‑2741261 ....................................................................................................GCCGGATCATCCTCGAGGGGATCGAGACCTGTCCGCGGGGGCCGCTGATCCTGTCGGCGGAATCGATCTCGTCCTTCGTGCCCGAAGAGGCCGAGGCGATGGTCGCCTT  <  NC_014034/2946287‑2946188                                                                                                                                                                                                                                                        tctGTTCGCCCGCGGCCAGCCGCACCATCGCCGCCGTCACCCCGCGCAGATTGCGCGAGAGCGGCCGGATCATCCTCGAGGGGATCGAGACCTGTCCGCGG                                                                         <  2:1413494/98‑1 (MQ=255)                                         GTTCGCCCGCGGCCAGCCGCACCATCGCCGCCGTCACCCCGCGCAGATTGCGCGAGAGCGGCCGGATCATCCTCGAGGGGATCGAGACCTGTCCGCGGaga                                                                      >  1:1413621/1‑98 (MQ=255)                                                                                                                                                                                                                   ATCTCGTCGGCGCGGTTGGCACCGGGCACGGTGGCGTCGCGTTCGCCCGCGGCCAGCCGCACCATCGCCGCCGTCACCCCGCGCAGATTGCGCGAGAGCGGCCGGATCA....................................................................................................  <  NC_014034/2741369‑2741261 ....................................................................................................GCCGGATCATCCTCGAGGGGATCGAGACCTGTCCGCGGGGGCCGCTGATCCTGTCGGCGGAATCGATCTCGTCCTTCGTGCCCGAAGAGGCCGAGGCGATGGTCGCCTT  <  NC_014034/2946287‑2946188 Base quality scores:  ATCG  < 3 ≤  ATCG  < 27 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG