New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2745635 =291 (1.200)2 (0.010) 2/198 29.6 0.01 coding (52/219 nt) infA translation initiation factor IF
?NC_014034 2745649 = 280 (1.140)coding (38/219 nt) infA translation initiation factor IF
Rejected: Position hash score below cutoff.

AAGAAAGCGCGCCCGCCGCCTCCGTGCGGGTATCCCCAATGGAGTGACCATGGCCAAGGAAGAAATGCTCGAATTCCCCGGCGTCGTGAAGGAACTCCTGC....................................................................................................  <  NC_014034/2745735‑2745635
....................................................................................................CACGACGCCGGGGAATTCGAGCATTTCTTCCTTGGCCATGGTCACTCCATTGGGGATACCCGCACGGAGGCGGCGGGCGCGCTTTCTTTGCGCCCGCTAAA  >  NC_014034/2745649‑2745748
                                                                                                                                                                                                         
                        TGCGGGTATCCCCAATGGAGTGACCATGGCCAAGGAAGAAATGGTCGAATTCCCCGGCGTCGTCAAGGAACTCCTGCACGACGCCGGGGAATTCGAGCATT                                                                              >  1:4314178/1‑101 (MQ=255)
                               ATCCCCAATGGAGTGACCATGGCCAAGGAAGAAATGCTCGAATTCCCCGGCGTCGTGAAGGAACTCCTGCACGACGCCGGGGAATTCGAGCATTTCTTCCT                                                                       <  2:4313861/101‑1 (MQ=255)
                                                                                                                                                                                                         
AAGAAAGCGCGCCCGCCGCCTCCGTGCGGGTATCCCCAATGGAGTGACCATGGCCAAGGAAGAAATGCTCGAATTCCCCGGCGTCGTGAAGGAACTCCTGC....................................................................................................  <  NC_014034/2745735‑2745635
....................................................................................................CACGACGCCGGGGAATTCGAGCATTTCTTCCTTGGCCATGGTCACTCCATTGGGGATACCCGCACGGAGGCGGCGGGCGCGCTTTCTTTGCGCCCGCTAAA  >  NC_014034/2745649‑2745748

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG