New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	= 2779400	143 (0.650)	2 (0.010)	2/180	28.3	0.01	coding (198/1938 nt)	fadJ	fatty acid oxidation complex subunit alpha
	?	NC_014034	= 3689537	215 (0.880)					coding (1459/1656 nt)	fliF	flagellar M‑ring protein FliF
Rejected: Position hash score below cutoff.

AGATCGTGCCCGACAGCACCGCCACCACCGGCACCGTCGCCTGCAAAAGCCGCGTGCACAGCGCCGCAAGTGTCGGCTGCTCGGGGCTGTAATCCTCGGCCGGGTCGATG....................................................................................................  >  NC_014034/2779291‑2779400 ....................................................................................................CGGGTCGATGAACGTGGTCTCCGATTTCGACATCGGCGACATGCCGATGACCATGGGCACCGGCAACTTCGGCGACATGGGCATGGGCGGCGAGTCGGGTCAGGCCAGCG  <  NC_014034/3689537‑3689438                                                                                                                                                                                                                                                                   AGCCGCGTGCACAGCGCCGCAAGTGTCGGCTGCTCGGGGCTGTAATCCTCGGCCGGGTCGATGAACGTGGTCTCCGATTTCGACATCGGCGACATGCCGAT                                                                >  1:3918133/1‑101 (MQ=255)                                                            AGCGCCGCAAGTGTCGGCTGCTCGGGGCTGTAATCCTCGGCCGGGTCGATGAACGTGGTCTCCGATTTCGACATCGGCGACATGCCGATGACCATGGGCAC                                                    <  2:3917841/101‑1 (MQ=255)                                                                                                                                                                                                                    AGATCGTGCCCGACAGCACCGCCACCACCGGCACCGTCGCCTGCAAAAGCCGCGTGCACAGCGCCGCAAGTGTCGGCTGCTCGGGGCTGTAATCCTCGGCCGGGTCGATG....................................................................................................  >  NC_014034/2779291‑2779400 ....................................................................................................CGGGTCGATGAACGTGGTCTCCGATTTCGACATCGGCGACATGCCGATGACCATGGGCACCGGCAACTTCGGCGACATGGGCATGGGCGGCGAGTCGGGTCAGGCCAGCG  <  NC_014034/3689537‑3689438 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG