New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 2804042 =191 (0.850)3 (0.010) 3/184 27.5 0.01 coding (515/1263 nt) ttuD hydroxypyruvate reductase
?NC_014034 3492829 = 212 (0.870)coding (643/1227 nt) RCAP_rcc03300 radical SAM family protein
Rejected: Position hash score below cutoff.

GAAACAGGCGGTGACCGCGGCGCTGCTGGCCTCGGGGGCGCCGATCGAGCAGATCAACACGGTGCGCAAGCATCTGAGCGCGGTCAAGGGCGGGCAGCTGGCGGCGGC....................................................................................................  <  NC_014034/2804149‑2804042
....................................................................................................GCGGCGGCCATCGGGCAAAAGCCGCTCATGCGCCGGGATGAACTGCAGGAACTCCGGCCCGAGCCCCGCCAGATAGCGATAGACCGCAACCGGATCGGCGACATTCGC  >  NC_014034/3492829‑3492928
                                                                                                                                                                                                                
                            gatctGGGGGCGCCGATCGAGCAGATCAACACGGTGCGCAAGCATCTGAGCGCGGTCAAGGGCGGGCAGCTGGCGGCGGCCATCGGGCAAAAGCCGCTCAT                                                                                 <  2:3429728/96‑1 (MQ=255)
                                 GGGGGCGCCGATCGAGCAGATCAACACGGTGCGCAAGCATCTGAGCGCGGTCAAGGGCGGGCAGCTGGCGGCGGCCATCGGGCAAAAGCCGCTCATagatc                                                                            >  1:3429992/1‑96 (MQ=255)
                                                                                                   GGCGGCGGCCATCGGGCAAAAGCCGCTCAGGCGCCGGGATGAACTGCAGGAACTCCGGCCCGAGCCCCGCCAGATAGCGATAGACCGCAACCGAATCGGCG          <  2:2501984/101‑1 (MQ=255)
                                                                                                                                                                                                                
GAAACAGGCGGTGACCGCGGCGCTGCTGGCCTCGGGGGCGCCGATCGAGCAGATCAACACGGTGCGCAAGCATCTGAGCGCGGTCAAGGGCGGGCAGCTGGCGGCGGC....................................................................................................  <  NC_014034/2804149‑2804042
....................................................................................................GCGGCGGCCATCGGGCAAAAGCCGCTCATGCGCCGGGATGAACTGCAGGAACTCCGGCCCGAGCCCCGCCAGATAGCGATAGACCGCAACCGGATCGGCGACATTCGC  >  NC_014034/3492829‑3492928

Base quality scores:  ATCG  < 3 ≤  ATCG  < 18 ≤  ATCG  < 25 ≤  ATCG  < 32 ≤  ATCG  < 40 ≤  ATCG