New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3028553 =212 (0.930)3 (0.010) 3/186 27.7 0.01 coding (281/2256 nt) rnr ribonuclease R
?NC_014034 = 3616674 237 (0.970)coding (268/756 nt) ugpQ glycerophosphoryl diester phosphodiesterase
Rejected: Position hash score below cutoff.

AAGAGCCATTATCACGATCAGGCCAGCCTGCCGCCGGTGACGGTGCTGGAAATCCTGCCCGCCGACGCCATGGGCGATCTTTGGGCGCGGCCGGTGGAATGGGCGGG....................................................................................................  <  NC_014034/3028659‑3028553
....................................................................................................GGGCGGGGACGAGGGTATTCCGACGTTGGCCGAGGTGCTGGAGATCGTCGCGGGCCGGGTGCCGCTGCTGATCGAGATCAAGGATCAGGATGGCGCGATGGGCCCCG  <  NC_014034/3616674‑3616575
                                                                                                                                                                                                               
       ATTATCACGATCAGGCCAGCCTGCCGCCGGTGACGGTGCTGGAAATCCTGCCCGCCGACGCCATGGGCGATCTTTGGGCGCGGCCGGTGGAATGGGCGGGG                                                                                                     >  2:3759479/1‑101 (MQ=255)
                                   GGTGACGGTGCTGGAAATCCTGCCCGCCGACGCCATGGGCGATCTTTGGGCGCGGCCGGTGGAATGGGCGGGGACGAGGGTATTCCGACGTTGGCCGAGGT                                                                         >  1:1173669/1‑101 (MQ=255)
                                                GAAATCCTGCCCGCCGACGCCATGGGCGATCTTTGGGCGCGGCCGGTGGAATGGGCGGGGACGAGGGTATTCCGACGTTGGCCGAGGTGCTGGAGATCGTC                                                            <  2:1173552/101‑1 (MQ=255)
                                                                                                                                                                                                               
AAGAGCCATTATCACGATCAGGCCAGCCTGCCGCCGGTGACGGTGCTGGAAATCCTGCCCGCCGACGCCATGGGCGATCTTTGGGCGCGGCCGGTGGAATGGGCGGG....................................................................................................  <  NC_014034/3028659‑3028553
....................................................................................................GGGCGGGGACGAGGGTATTCCGACGTTGGCCGAGGTGCTGGAGATCGTCGCGGGCCGGGTGCCGCTGCTGATCGAGATCAAGGATCAGGATGGCGCGATGGGCCCCG  <  NC_014034/3616674‑3616575

Base quality scores:  ATCG  < 3 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG