New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 310401 =183 (0.820)2 (0.010) 2/182 28.4 0.01 coding (1123/1761 nt) RCAP_rcc00272 heparinase II/III family protein
?NC_014034 = 1842567 247 (1.010)coding (310/507 nt) ppiA peptidyl‑prolyl cis‑trans isomerase A
Rejected: Position hash score below cutoff.

CAATGCCCATGCCTCGACGCTGGCCTTTGAACTCACCTCGGGGCGCTGGCCGCTGATCGTCAATTGCGGCTCGGGGGCGATGTTCGGCCCCGACTGGCACCGCGCCG...................................................................................................  <  NC_014034/310507‑310401
..................................................................................................ACCGCGCCGCGCCGAGGCTGCCGCGCGCATGCGGCACCTTGGAAAATTCCGCTTTCAGATCAGGATATTGCGACCCGCCCGTGCCGGCGCGGCGGGGGTTGTAATCCT  <  NC_014034/1842567‑1842469
                                                                                                                                                                                                              
                                                                        GGGGGCGATGTTCGGCCCCGACTGGCACCGCGCCGCGCCGAGGCTGCCGCGCGCATGCGGCACCTTGGAAAATTCCGCTTTCAGATCAGGATATTGCGACC                                   >  2:229670/1‑101 (MQ=255)
                                                                          GGGCGATGTTCGGCCCCGACTGGCACCGCGCCGCGCCGAGGCTGCCGCGCGCATGCGGCACCTTGGAAAATTCCGCTTTCAGATCAGGATATTGCGACCCG                                 <  1:229704/101‑1 (MQ=255)
                                                                                                                                                                                                              
CAATGCCCATGCCTCGACGCTGGCCTTTGAACTCACCTCGGGGCGCTGGCCGCTGATCGTCAATTGCGGCTCGGGGGCGATGTTCGGCCCCGACTGGCACCGCGCCG...................................................................................................  <  NC_014034/310507‑310401
..................................................................................................ACCGCGCCGCGCCGAGGCTGCCGCGCGCATGCGGCACCTTGGAAAATTCCGCTTTCAGATCAGGATATTGCGACCCGCCCGTGCCGGCGCGGCGGGGGTTGTAATCCT  <  NC_014034/1842567‑1842469

Base quality scores:  ATCG  < 3 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 36 ≤  ATCG  < 41 ≤  ATCG