New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3129393257 (1.090)2 (0.010) 2/192 29.2 0.01 coding (276/1257 nt) RCAP_rcc02936 hypothetical protein
?NC_014034 = 3129402 264 (1.080)coding (285/1257 nt) RCAP_rcc02936 hypothetical protein
Rejected: Position hash score below cutoff.

GCTTCTTAAGATGGCCGTCGCCTATCATCGCCCCCTTGTTGCACTATACATGGCAGAGCCGCCTCGGCCAGCAGAGCGCGTTGAAGACTTTAGAACGATTGGC....................................................................................................  >  NC_014034/3129291‑3129393
...................................................................................................TGGCAACTGGTGCGCCAATCGTTCTAAAGTCTTCAACGCGCTCTGCTGGCCGAGGCGGCTCTGCCATGTATAGTGCAACAAGGGGGCGATGATAGGCGACGGCC  <  NC_014034/3129402‑3129303
                                                                                                                                                                                                           
                                                                            CGCGTTGAAGACTTTAGAACGATTGGCAACTGGTGCGCCAATCGTTCTAAAGTCTTCAACGCGCTCTGCTGGCCGAGGCGGCTCTGCCATGTATAGTGCAA                            >  2:4025081/1‑101 (MQ=255)
                                                                             GCGTTGAAGACTTTAGAACGATTGGCAACTGGTGCGCCAATCGTTCTAAAGTCTTCAACGCGCTCTGCTGGCCGAGGCGGCTCTGCCATGTATAGTGCAAC                           <  1:4025384/101‑1 (MQ=255)
                                                                                                                                                                                                           
GCTTCTTAAGATGGCCGTCGCCTATCATCGCCCCCTTGTTGCACTATACATGGCAGAGCCGCCTCGGCCAGCAGAGCGCGTTGAAGACTTTAGAACGATTGGC....................................................................................................  >  NC_014034/3129291‑3129393
...................................................................................................TGGCAACTGGTGCGCCAATCGTTCTAAAGTCTTCAACGCGCTCTGCTGGCCGAGGCGGCTCTGCCATGTATAGTGCAACAAGGGGGCGATGATAGGCGACGGCC  <  NC_014034/3129402‑3129303

Base quality scores:  ATCG  < 3 ≤  ATCG  < 32 ≤  ATCG  < 34 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG