New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3179205188 (0.830)2 (0.010) 2/184 28.6 0.01 coding (404/1101 nt) RCAP_rcc02988 hypothetical protein
?NC_014034 = 3556475 203 (0.830)coding (295/858 nt) RCAP_rcc03359 iron siderophore/cobalamin ABC transporter periplasmic iron siderophore/cobalamin‑binding protein
Rejected: Position hash score below cutoff.

CGGGCGTGTCGATCAGCGTTCCCGGCGTGAAACAGATCACCCCGGGCGCGGCCAGACGCAGCCCCGCCGGGCGCGGATCGACGCGGCTTTCGACCAGCCACAGATCGG....................................................................................................  >  NC_014034/3179098‑3179205
....................................................................................................CAGATCGGGATGCAGCAGATAGACCTCTTCGGCCTGACCGCGGTTCGCGGGATAAGCCCTTGCGGCTTCGGCCATCACCGAGGCGGCGGGATCGCGGGCCAGACGGGT  <  NC_014034/3556475‑3556376
                                                                                                                                                                                                                
                            tAAACAGATCACCCCGGGCGCGGCCAGACGCAGCCCCGCCGGGCGCGGATCGAGGCGGCTTTCGACCAGCCACAGATCGGGATGCAGCAGATAGACCTCTT                                                                                 <  2:4369814/100‑1 (MQ=255)
                             AAACAGATCACCCCGGGCGCGGCCAGACGCAGCCCCGCCGGGCGCGGATCGACGCGGCTTTCGACCAGCCACAGATCGGGATGCAGCAGATAGACCTCTTa                                                                                >  1:4370131/1‑100 (MQ=255)
                                                                                                                                                                                                                
CGGGCGTGTCGATCAGCGTTCCCGGCGTGAAACAGATCACCCCGGGCGCGGCCAGACGCAGCCCCGCCGGGCGCGGATCGACGCGGCTTTCGACCAGCCACAGATCGG....................................................................................................  >  NC_014034/3179098‑3179205
....................................................................................................CAGATCGGGATGCAGCAGATAGACCTCTTCGGCCTGACCGCGGTTCGCGGGATAAGCCCTTGCGGCTTCGGCCATCACCGAGGCGGCGGGATCGCGGGCCAGACGGGT  <  NC_014034/3556475‑3556376

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG