New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	32589 =	238 (1.090)	2 (0.010)	2/178	28.2	0.01	coding (1555/3501 nt)	RCAP_rcc00026	hypothetical protein
	?	NC_014034	2924828 =	213 (0.870)					coding (2168/2556 nt)	RCAP_rcc02735	virulence‑associated protein E
Rejected: Position hash score below cutoff.

GCAAGCTGGCAAGCCTCTCCGCGCTGGCGGGCCGGGCCCTGTCCGGCTCTGTTTCGACCCATCTTGACGGCACCTATGTCCTTTCCAGCGGCGCCTTCGAGGCCGAAGCCG...................................................................................................  <  NC_014034/32699‑32589 ....................................................................................................GGCCGAAGCCGTCCATCGCTTCCGCGAAGGTGCGATCTGGTGGATCGACGATCCGGCGTTGCTGGCCGAAGCTGCTACCGCGCAGGAAGCGCGCTATCAGGCGGATGCCT  >  NC_014034/2924828‑2924926                                                                                                                                                                                                                                                     GGGCCCTGTCCGGCTCTGTTTCGACCCATCTTGACGGCACCTATGTCCTTTCCAGCGGCGCCTTCGAGGCCGAAGCCGTCCATCGCTTCCGCGAAGGTGCG                                                                              >  1:1662403/1‑101 (MQ=255)                                     CCCTGTCCGGCTCTGTTTCGACCCATCTTGACGGCACCTATGTCCTTTCCAGCGGCGCCTTCGAGGCCGAAGCCGTCCATCGCTTCCGCGAAGGTGCGATC                                                                           <  2:1662274/101‑1 (MQ=255)                                                                                                                                                                                                                    GCAAGCTGGCAAGCCTCTCCGCGCTGGCGGGCCGGGCCCTGTCCGGCTCTGTTTCGACCCATCTTGACGGCACCTATGTCCTTTCCAGCGGCGCCTTCGAGGCCGAAGCCG...................................................................................................  <  NC_014034/32699‑32589 ....................................................................................................GGCCGAAGCCGTCCATCGCTTCCGCGAAGGTGCGATCTGGTGGATCGACGATCCGGCGTTGCTGGCCGAAGCTGCTACCGCGCAGGAAGCGCGCTATCAGGCGGATGCCT  >  NC_014034/2924828‑2924926 Base quality scores:  ATCG  < 3 ≤  ATCG  < 7 ≤  ATCG  < 15 ≤  ATCG  < 27 ≤  ATCG  < 39 ≤  ATCG