New junction evidence
		seq id	position	reads (cov)	reads (cov)	score	skew	freq	annotation	gene	product
*	?	NC_014034	3346838 =	221 (0.980)	2 (0.010)	2/184	28.6	0.01	coding (1285/1602 nt)	alkJ	alcohol dehydrogenase
	?	NC_014034	3500236 =	238 (0.970)					coding (295/1098 nt)	RCAP_rcc03305	hypothetical protein
Rejected: Position hash score below cutoff.

AATCGCGGGGGACGGTGCGGCTGGCGTCGAAGAACCCGCGCAAGGCGCCCTTGATCGACCCGGCCTTTCTGGCCGATCCGCGCGACGAAGCCCTGATGCTGCGGGCGG....................................................................................................  <  NC_014034/3346945‑3346838 ....................................................................................................GCGGGCGGATGCGGCTGACCTTCAGCTGGGATTGCAGGACTGACGAGACCCGGCTGACGCTGGAGACGATCGACGGCGGGCAGATCCGCCAGCGCGTCGGCACCGGGG  >  NC_014034/3500236‑3500335                                                                                                                                                                                                                                                            AGGCGCCCTTGATCGACCCGGCCTTTCTGGCCGATCCGCGCGACGAAGCCCTGATGCTGCGGGCGGATGCGGCTGACCTTCAGCTGGGATTGCAGGACTGA                                                                   >  2:935974/1‑101 (MQ=255)                                                  CTTGATCGACCCGGCCTTTCTGGCCGATCCGCGCGACGAAGCCCTGATGCTGCGGGCGGATGCGGCTGACCTTCAGCTGGGATTGCAGGACTGACGAGACC                                                            <  1:936079/101‑1 (MQ=255)                                                                                                                                                                                                                  AATCGCGGGGGACGGTGCGGCTGGCGTCGAAGAACCCGCGCAAGGCGCCCTTGATCGACCCGGCCTTTCTGGCCGATCCGCGCGACGAAGCCCTGATGCTGCGGGCGG....................................................................................................  <  NC_014034/3346945‑3346838 ....................................................................................................GCGGGCGGATGCGGCTGACCTTCAGCTGGGATTGCAGGACTGACGAGACCCGGCTGACGCTGGAGACGATCGACGGCGGGCAGATCCGCCAGCGCGTCGGCACCGGGG  >  NC_014034/3500236‑3500335 Base quality scores:  ATCG  < 3 ≤  ATCG  < 29 ≤  ATCG  < 32 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG