New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 3497739 =182 (0.760)2 (0.010) 2/196 29.4 0.01 coding (161/420 nt) RCAP_rcc03302 GNAT family acetyltransferase
?NC_014034 = 3497916 276 (1.130)coding (1120/1140 nt) dapE succinyl‑diaminopimelate desuccinylase
Rejected: Position hash score below cutoff.

CATCGAGGAACAGGGCGTGCCCGAGGCCGAGGAATGGGACGATCTGGACGGGCAGGCGGTGCATCTGCTGGCGCTGGAGGGCGCGGCCGCGCTGGGCACGGC....................................................................................................  <  NC_014034/3497840‑3497739
....................................................................................................GCCTGCGCGATTTCTTCGCATGAGGATCGTCGAGACCACCGATCTGACTGCGGTGCATGCGCTGCGCCGCGCCGTCTTCATCGAGGAACAGGGCGTGCCCGA  <  NC_014034/3497916‑3497817
                                                                                                                                                                                                          
                                                       GCGGTGCATCTGCTGGCGCTGGAGGGCGCGGCCGCGCTGGGCACGGCCTGCGCGATTTCTTCGCATGAGGATCGTCGAGACCACCGATCTGACTGCGGTGC                                                >  1:2310635/1‑101 (MQ=255)
                                                                          TGGAGGGCGCGGCCGCGCTGGGCACGGCCTGCGCGATTTCTTCGCATGAGGATCGTCGAGACCACCGATCTGACTGCGGTGCATGCGCTGCGCCGCGCCGT                             <  2:2310471/101‑1 (MQ=255)
                                                                                                                                                                                                          
CATCGAGGAACAGGGCGTGCCCGAGGCCGAGGAATGGGACGATCTGGACGGGCAGGCGGTGCATCTGCTGGCGCTGGAGGGCGCGGCCGCGCTGGGCACGGC....................................................................................................  <  NC_014034/3497840‑3497739
....................................................................................................GCCTGCGCGATTTCTTCGCATGAGGATCGTCGAGACCACCGATCTGACTGCGGTGCATGCGCTGCGCCGCGCCGTCTTCATCGAGGAACAGGGCGTGCCCGA  <  NC_014034/3497916‑3497817

Base quality scores:  ATCG  < 3 ≤  ATCG  < 24 ≤  ATCG  < 30 ≤  ATCG  < 33 ≤  ATCG  < 40 ≤  ATCG