New junction evidence
  seq id position reads (cov) reads (cov) score skew freq annotation gene product
* ? NC_014034 = 3607096230 (1.020)2 (0.010) 2/184 28.6 0.01 coding (651/2616 nt) clpB chaperone ClpB
?NC_014034 = 3733371 228 (0.930)coding (2487/2811 nt) RCAP_rcc03528 hypothetical protein
Rejected: Position hash score below cutoff.

GGCCGCGACGATGAAATCCGCCGCACCATGCAGGTGCTGTCGCGTCGTACCAAGAACAACCCGGTGCTGATCGGGGAACCCGGCGTGGGCAAAACCGCCATTGCCGAG....................................................................................................  >  NC_014034/3606989‑3607096
....................................................................................................TTGCCGAGTTCCTCGGGGGACAGGGTCAGTTCGACGGTCCGGTTTCCGGCATCGGCCAGGGCCTGTGACATCTGATGGGCGATCGCATGCGGGCTGGCGGCCCGATGT  <  NC_014034/3733371‑3733272
                                                                                                                                                                                                                
                                                                  CTGATCGGGGAACCCGGCGTGGGCAAAACCGCCATTGCCGAGTTCCTCGGGGGACAGGGTCAGTTCGACGGTCCGGTTTCCGGCATCGGCCAGGGCCTGTG                                           >  2:3790543/1‑101 (MQ=255)
                                                                       CGGGGAACCCGGCGTGGGCAAAACCGCCATTGCCGAGTTCCTCGGGGGACAGGGTCAGTTCGACGGTCCGGTTTCCGGCATCGGCCAGGGCCTGTGACATC                                      <  1:3790828/101‑1 (MQ=255)
                                                                                                                                                                                                                
GGCCGCGACGATGAAATCCGCCGCACCATGCAGGTGCTGTCGCGTCGTACCAAGAACAACCCGGTGCTGATCGGGGAACCCGGCGTGGGCAAAACCGCCATTGCCGAG....................................................................................................  >  NC_014034/3606989‑3607096
....................................................................................................TTGCCGAGTTCCTCGGGGGACAGGGTCAGTTCGACGGTCCGGTTTCCGGCATCGGCCAGGGCCTGTGACATCTGATGGGCGATCGCATGCGGGCTGGCGGCCCGATGT  <  NC_014034/3733371‑3733272

Base quality scores:  ATCG  < 3 ≤  ATCG  < 31 ≤  ATCG  < 33 ≤  ATCG  < 35 ≤  ATCG  < 41 ≤  ATCG